RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 KCNAB3O43448 404 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 TP53P04637 393 aaPredicted RBP11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 PRSS56P0CW18 603 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 NID1P14543 1247 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 ZFXP17010 805 aaPredicted RBP11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 TPH1P17752 444 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 FPR1P21462 350 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 MAN2A2P49641 1150 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 ZNF140P52738 457 aaPredicted RBP11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 TAS2R40P59535 323 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 SORDQ00796 357 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 ABRAXAS2Q15018 415 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 DBN1Q16643 649 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 C10orf62Q5T681 223 aaPredicted RBP11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 MAATS1Q7Z4T9 603 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 SLC22A15Q8IZD6 547 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 SHISA5Q8N114 240 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 RAB42Q8N4Z0 105 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 RAD51AP1Q96B01 352 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 DACH2Q96NX9 599 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 OR2A5Q96R48 311 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 CCL19Q99731 98 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 C19orf24Q9BVV8 132 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 LDAHQ9H6V9 325 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 DEPPQ9NTK1 212 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 ZNF629Q9UEG4 869 aaPredicted RBP11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 ABCA1O95477 2261 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 ARHGAP21Q5T5U3 1957 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 CUBNO60494 3623 aa11.72□□□□□ -0.53
AC004540.1-204ENST00000449537 A0A0U1RQJ8 604 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 FEZF1A0PJY2 475 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 LRRD1A4D1F6 860 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 MIF4GDA9UHW6 222 aaKnown RBP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 TLX2O43763 284 aaPredicted RBP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 SUSD5O60279 629 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 KIF5CO60282 957 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 OR56A5P0C7T3 313 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 PKMP14618 531 aaKnown RBP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 NAP1L1P55209 391 aaKnown RBP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 MPP1Q00013 466 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 HSPA14Q0VDF9 509 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 CCDC38Q502W7 563 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 NDUFAF5Q5TEU4 345 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 LRRC38Q5VT99 294 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 RANBP10Q6VN20 620 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 PCGF5Q86SE9 256 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 VSIG1Q86XK7 387 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 CPNE8Q86YQ8 564 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 VRK3Q8IV63 474 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 HMGCLL1Q8TB92 370 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 TFB1MQ8WVM0 346 aaKnown RBP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 KIAA1191Q96A73 305 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 DEFB126Q9BYW3 111 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 AMBRA1Q9C0C7 1298 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 SYNPO2LQ9H987 977 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 LIPGQ9Y5X9 500 aa11.71□□□□□ -0.53
AC004540.1-204ENST00000449537 A0A1W2PPV9 198 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 MACROD2A1Z1Q3 448 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 PINLYPA6NC86 204 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 MAGEB17A8MXT2 336 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ZNF487B1APH4 448 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 F8W8V4 182 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 PSTPIP1O43586 416 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 NSA2O95478 260 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 GEMP55040 296 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 MSLNQ13421 630 aaPredicted RBP11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ITIH4Q14624 930 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 SLC10A1Q14973 349 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ACKR1Q16570 336 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 SEM1Q6ZVN7 128 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 MICALCLQ6ZW33 695 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 BZW1Q7L1Q6 419 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ZNF567Q8N184 647 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ARMC10Q8N2F6 343 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 NAXEQ8NCW5 288 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 OR2M7Q8NG81 312 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ASZ1Q8WWH4 475 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 VAT1Q99536 393 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 APOL2Q9BQE5 337 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ACAT2Q9BWD1 397 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 TTTY12Q9BZ98 90 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 GSX2Q9BZM3 304 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 EXO5Q9H790 373 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 MRPS30Q9NP92 439 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 LZTFL1Q9NQ48 299 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 UTP6Q9NYH9 597 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 HCN3Q9P1Z3 774 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 ERVK-11Q9UQG0 969 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 DRG1Q9Y295 367 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 NPFFR2Q9Y5X5 522 aa11.7□□□□□ -0.54
AC004540.1-204ENST00000449537 DSCAMO60469 2012 aa11.69□□□□□ -0.54
AC004540.1-204ENST00000449537 SCN3AQ9NY46 2000 aa11.69□□□□□ -0.54
AC004540.1-204ENST00000449537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.54
AC004540.1-204ENST00000449537 H7C0S8 307 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms