RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GPR78Q96P69 363 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 ATOH8Q96SQ7 321 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 CYTH2Q99418 400 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 EGFL8Q99944 293 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 SLC6A16Q9GZN6 736 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 VN1R1Q9GZP7 353 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 KLHL31Q9H511 634 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 ZNF490Q9ULM2 529 aaPredicted RBP13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 NAALAD2Q9Y3Q0 740 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 ASB1Q9Y576 335 aa13.31□□□□□ -0.28
RTFDC1-204ENST00000449062 PABPN1LA6NDY0 278 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 OR2W5A6NFC9 320 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 NCF1BA6NI72 391 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 NCF1CA8MVU1 366 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 PCDH17O14917 1159 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 GALR3O60755 368 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 DPM1O60762 260 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 STK16O75716 305 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 KLHL18O94889 574 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 B3GALT4O96024 378 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 HPP00738 406 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 C2P06681 752 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 MTHFD2P13995 350 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 NCF1P14598 390 aaPredicted RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 ACPPP15309 386 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 GNAZP19086 355 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 KCNC4Q03721 635 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 PCDH1Q08174 1060 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 HERC3Q15034 1050 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 FBXO48Q5FWF7 155 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 MROH9Q5TGP6 573 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 STAG3L4Q8TBR4 150 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 UTP15Q8TED0 518 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 IFT81Q8WYA0 676 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 NXNL1Q96CM4 212 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 WDR34Q96EX3 536 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 AIF1LQ9BQI0 150 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 ZNF700Q9H0M5 742 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 TSPYL1Q9H0U9 437 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 CDC42EP4Q9H3Q1 356 aaKnown RBP13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 EHD1Q9H4M9 534 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 NT5DC2Q9H857 520 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 NMRAL1Q9HBL8 299 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 ANKHQ9HCJ1 492 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 LANCL2Q9NS86 450 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 GPRC5BQ9NZH0 403 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 MKL2Q9ULH7 1088 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 ACOT9Q9Y305 439 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 DYRK1BQ9Y463 629 aa13.3□□□□□ -0.28
RTFDC1-204ENST00000449062 COL12A1Q99715 3063 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 IGHV1-45A0A0A0MS14 117 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 C4orf51C9J302 202 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 MAP2K7O14733 419 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 NDUFS4O43181 175 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 KLHL41O60662 606 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 RDH16O75452 317 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 WDR47O94967 919 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ZIC2O95409 532 aaPredicted RBP13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 HEXBP07686 556 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 SERPINA6P08185 405 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CYC1P08574 325 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 LTA4HP09960 611 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 SLC35G6P0C7Q6 338 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ALOX12P18054 663 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 TFEBP19484 476 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CD22P20273 847 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CASP2P42575 452 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 XCR1P46094 333 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CDC16Q13042 620 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 BMPR2Q13873 1038 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 PCOLCEQ15113 449 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 SLC6A19Q695T7 634 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 FRA10AC1Q70Z53 315 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 VN1R5Q7Z5H4 357 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 TCAIMQ8N3R3 496 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 PLPP5Q8NEB5 264 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 TRPV3Q8NET8 790 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 OR5T3Q8NGG3 340 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ZCCHC10Q8TBK6 192 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 SLC44A1Q8WWI5 657 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ISL2Q96A47 359 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 PNPLA2Q96AD5 504 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CAPS2Q9BXY5 557 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 MFRPQ9BY79 579 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CD244Q9BZW8 370 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 LHPPQ9H008 270 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ALG9Q9H6U8 611 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 CLK4Q9HAZ1 481 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 ZNF160Q9HCG1 818 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 DNAJC11Q9NVH1 559 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 HCN3Q9P1Z3 774 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 MTRF1LQ9UGC7 380 aaKnown RBP13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 PLAAQ9Y263 795 aa13.29□□□□□ -0.28
RTFDC1-204ENST00000449062 SHANK1Q9Y566 2161 aa13.28□□□□□ -0.28
RTFDC1-204ENST00000449062 SPTBN1Q01082 2364 aaKnown RBP13.28□□□□□ -0.28
RTFDC1-204ENST00000449062 HIVEP3Q5T1R4 2406 aa13.28□□□□□ -0.28
RTFDC1-204ENST00000449062 CHST10O43529 356 aa13.28□□□□□ -0.28
RTFDC1-204ENST00000449062 KERAO60938 352 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms