RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SPNS1Q9H2V7 528 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 SOX17Q9H6I2 414 aaPredicted RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 PRM3Q9NNZ6 103 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
USP39-206ENST00000448971 VPS4AQ9UN37 437 aa13.84□□□□□ -0.19
USP39-206ENST00000448971 LRBAP50851 2863 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 KCNE1BA0A087WTH5 132 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 FFAR3O14843 346 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 CLGNO14967 610 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 GPR42O15529 346 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 TAPBPO15533 448 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 LCMT2O60294 686 aaKnown RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 STK16O75716 305 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 KLF7O75840 302 aaPredicted RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 AGFG2O95081 481 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 KLHL2O95198 593 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 SLU7O95391 586 aaKnown RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 ALBP02768 609 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 RNF224P0DH78 156 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 GFAPP14136 432 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 IL1RNP18510 177 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 VARSP26640 1264 aaKnown RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 TNFRSF8P28908 595 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 RGS1Q08116 209 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 ATP1A4Q13733 1029 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 SLBPQ14493 270 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP39-206ENST00000448971 RBBP5Q15291 538 aaKnown RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 NKG7Q16617 165 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 FHL5Q5TD97 284 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 LGSNQ5TDP6 509 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 CPZQ66K79 652 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 NXPE4Q6UWF7 544 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 OVCH1Q7RTY7 1134 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 LRRC70Q7Z2Q7 622 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 MRGPREQ86SM8 312 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 KLHDC8AQ8IYD2 350 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 PRSS58Q8IYP2 241 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 ZNF740Q8NDX6 193 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 CPT1CQ8TCG5 803 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 ADAMTS17Q8TE56 1095 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 ISL2Q96A47 359 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 SCYL1Q96KG9 808 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 SPSB2Q99619 263 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 CAPS2Q9BXY5 557 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 WDR54Q9H977 334 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 ACSS2Q9NR19 701 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 GPRC5BQ9NZH0 403 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 TRPC4Q9UBN4 977 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 MRPS2Q9Y399 296 aaKnown RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 MAP4K5Q9Y4K4 846 aa13.83□□□□□ -0.2
USP39-206ENST00000448971 TEP1Q99973 2627 aaKnown RBP13.83□□□□□ -0.2
USP39-206ENST00000448971 PEX12O00623 359 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SEMA7AO75326 666 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SNRPAP09012 282 aaKnown RBP13.82□□□□□ -0.2
USP39-206ENST00000448971 CXCR2P25025 360 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 MAGEA12P43365 314 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SCTRP47872 440 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 FAM53BQ14153 422 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SLC29A2Q14542 456 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SSPNQ14714 243 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 ACAP2Q15057 778 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 TSNAXIP1Q2TAA8 658 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 NADK2Q4G0N4 442 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 KRT78Q8N1N4 520 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 KCT2Q8NC54 265 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 OR4K1Q8NGD4 311 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 OR9A4Q8NGU2 314 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 RHEBL1Q8TAI7 183 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SSC4DQ8WTU2 575 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 CCT6BQ92526 530 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 MIEF2Q96C03 454 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 CRB3Q9BUF7 120 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 TXLNGYQ9BZA5 131 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 SLC26A1Q9H2B4 701 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 ANKZF1Q9H8Y5 726 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 ANKHQ9HCJ1 492 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 C14orf105Q9NVL8 296 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 CPSF2Q9P2I0 782 aaKnown RBP13.82□□□□□ -0.2
USP39-206ENST00000448971 PSMC3IPQ9P2W1 217 aaPredicted RBP13.82□□□□□ -0.2
USP39-206ENST00000448971 XPR1Q9UBH6 696 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 OPTCQ9UBM4 332 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 ZFP69BQ9UJL9 534 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 FER1L5A0AVI2 2057 aa13.82□□□□□ -0.2
USP39-206ENST00000448971 IQANK1A0A1B0GTG1 560 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 CCDC189A1A4V9 331 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 FOXS1O43638 330 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 H2AFYO75367 372 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 SORBS2O94875 1100 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 NSA2O95478 260 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 ONECUT2O95948 504 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 UMODP07911 640 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 C1GALT1C1LP0DN25 315 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 GGT5P36269 586 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 KCNC1P48547 511 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 RRADP55042 308 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 MAT1AQ00266 395 aaKnown RBP13.81□□□□□ -0.2
USP39-206ENST00000448971 PWP1Q13610 501 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 RBBP7Q16576 425 aa13.81□□□□□ -0.2
USP39-206ENST00000448971 SYT16Q17RD7 645 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms