RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SNX15Q9NRS6 342 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 DNAJC11Q9NVH1 559 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 WWOXQ9NZC7 414 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 HCN3Q9P1Z3 774 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 C5AR2Q9P296 337 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 MKL2Q9ULH7 1088 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 NFU1Q9UMS0 254 aa12.06□□□□□ -0.48
PRPF40A-203ENST00000448428 A0A087X1B8 175 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 OR2W5A6NFC9 320 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF860A6NHJ4 632 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 MAP2K7O14733 419 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 GALR3O60755 368 aaPredicted RBP12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 DPM1O60762 260 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 PRAMEF4O60810 478 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 RDH16O75452 317 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 STK16O75716 305 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 KLHL18O94889 574 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 WISP1O95388 367 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 B3GALT4O96024 378 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 HPP00738 406 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 ALOX12P18054 663 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 CXCR2P25025 360 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 ITGA3P26006 1051 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 XCR1P46094 333 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 MLLT10P55197 1068 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 RGS1Q08116 209 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 HYAL2Q12891 473 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 HERC3Q15034 1050 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 IGFBP7Q16270 282 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 DEFB134Q4QY38 66 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 VWA5B1Q5TIE3 1220 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 PRAMEF9Q5VWM5 478 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 TMEM205Q6UW68 189 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 NDUFAF7Q7L592 441 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 HPS6Q86YV9 775 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 CENPLQ8N0S6 344 aaPredicted RBP12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 TRPV3Q8NET8 790 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 CREB3L4Q8TEY5 395 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 KCTD4Q8WVF5 259 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 SLC44A1Q8WWI5 657 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 EXT2Q93063 718 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 ATOH8Q96SQ7 321 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 CAPS2Q9BXY5 557 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 CD244Q9BZW8 370 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 KLHL31Q9H511 634 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 ZBTB20Q9HC78 741 aaPredicted RBP12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF160Q9HCG1 818 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 GPRC5BQ9NZH0 403 aa12.05□□□□□ -0.48
PRPF40A-203ENST00000448428 BAHCC1Q9P281 2608 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 LOC102723996A0A087X1L8 192 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 A0A096LPK6 155 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 IGHV1-45A0A0A0MS14 117 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 A0A1W2PQ72 361 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SUPT3HB4E1H0 165 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 UBXN8O00124 270 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 CLGNO14967 610 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 KLHL41O60662 606 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 KERAO60938 352 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SUPT3HO75486 399 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 IPO13O94829 963 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 ALDOAP04075 364 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 S100BP04271 92 aaPredicted RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 ALPPP05187 535 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SERPINA6P08185 405 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 RHOXF2BP0C7M4 288 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF888P0CJ79 500 aaPredicted RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SMIM10L1P0DMW3 83 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 COX6A1P12074 109 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 EPORP19235 508 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 TYK2P29597 1187 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 HNF4AP41235 474 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 CD97P48960 835 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 AGTR2P50052 363 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 EEF1A2Q05639 463 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SLBPQ14493 270 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 JMJD6Q6NYC1 403 aaPredicted RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 IGFL3Q6UXB1 125 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 TMIGD1Q6UXZ0 262 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 CCDC91Q7Z6B0 441 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 IFT20Q8IY31 132 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 AMER2Q8N7J2 671 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SNX31Q8N9S9 440 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 LRRN4CLQ8ND94 238 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 OR5T3Q8NGG3 340 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 UHMK1Q8TAS1 419 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 UTP15Q8TED0 518 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 PEX11GQ96HA9 241 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SMIM10Q96HG1 83 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 THOC3Q96J01 351 aaKnown RBP12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 GPR78Q96P69 363 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 RHOXF2Q9BQY4 288 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 SLC6A16Q9GZN6 736 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 VN1R1Q9GZP7 353 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 AICDAQ9GZX7 198 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 ZNF700Q9H0M5 742 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 NUDT4Q9NZJ9 180 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 COPG2Q9UBF2 871 aa12.04□□□□□ -0.48
PRPF40A-203ENST00000448428 ASB1Q9Y576 335 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms