RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GLB1L3Q8NCI6 653 aaPredicted RBP4.59□□□□□ -1.67
SDCBP-205ENST00000447267 HCAR2Q8TDS4 363 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 PARD3BQ8TEW8 1205 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 SLC20A1Q8WUM9 679 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 SLC35F5Q8WV83 523 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 VPS50Q96JG6 964 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 NRTNQ99748 197 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 RHNO1Q9BSD3 238 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 CRB3Q9BUF7 120 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 ABCG8Q9H221 673 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 UNKLQ9H9P5 680 aaKnown RBP4.59□□□□□ -1.67
SDCBP-205ENST00000447267 FAM60AQ9NP50 221 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 LHX3Q9UBR4 397 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 ACSL5Q9ULC5 683 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 TNFRSF18Q9Y5U5 241 aa4.59□□□□□ -1.67
SDCBP-205ENST00000447267 DOCK4Q8N1I0 1966 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 CPAMD8Q8IZJ3 1885 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 IGHV1-45A0A0A0MS14 117 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 LCE6AA0A183 80 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 GSAPA4D1B5 854 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MBD3L3A6NE82 208 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 HSPB2A8KAH6 182 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 H3BMH7 237 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 TRIM77I1YAP6 450 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 FOXN3O00409 490 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 SSX4O60224 188 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 KDM1AO60341 852 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PALMO75781 387 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PLAUP00749 431 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 RPN1P04843 607 aaKnown RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 SLC2A3P11169 496 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 GYPEP15421 78 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 ZNF8P17098 575 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 LOXP28300 417 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 LSP1P33241 339 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 OR1D4P47884 311 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 AP3M2P53677 418 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 SORDQ00796 357 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 NHLH2Q02577 135 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 KLC1Q07866 573 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 LGALS3BPQ08380 585 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 LOXL1Q08397 574 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 TRIM14Q14142 442 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 CYTH1Q15438 398 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 FAM189A2Q15884 450 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 HSPB2Q16082 182 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 BEAN1Q3B7T3 259 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 CCDC14Q49A88 953 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PDCD4Q53EL6 469 aaKnown RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 CT83Q5H943 113 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 C1orf220Q5T0J3 134 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 ARMC6Q6NXE6 501 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 KLHL35Q6PF15 583 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MTERF4Q7Z6M4 381 aaKnown RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 TSPAN33Q86UF1 283 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PASD1Q8IV76 773 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MBD3L2Q8NHZ7 208 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 N4BP2L2Q92802 583 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 TAF15Q92804 592 aaKnown RBP eCLIP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MSI2Q96DH6 328 aaKnown RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 EEF2KMTQ96G04 330 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 COX14Q96I36 57 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 WFIKKN1Q96NZ8 548 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 KCTD10Q9H3F6 313 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 SERHL2Q9H4I8 314 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 WDR54Q9H977 334 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 AKIP1Q9NQ31 210 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PLCB1Q9NQ66 1216 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 CISHQ9NSE2 258 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 KLHL28Q9NXS3 571 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PDP1Q9P0J1 537 aaPredicted RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 C3orf18Q9UK00 162 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 PACSIN3Q9UKS6 424 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 NOL7Q9UMY1 257 aaKnown RBP4.58□□□□□ -1.68
SDCBP-205ENST00000447267 LIPGQ9Y5X9 500 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MAU2Q9Y6X3 613 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 ANKRD12Q6UB98 2062 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 DSCAMO60469 2012 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 SCN2AQ99250 2005 aa4.58□□□□□ -1.68
SDCBP-205ENST00000447267 MARCH11A6NNE9 402 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 SLCO1B7G3V0H7 640 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 G3V4G9 280 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 CDC7O00311 574 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 SMAD9O15198 467 aaKnown RBP4.57□□□□□ -1.68
SDCBP-205ENST00000447267 SLC16A3O15427 465 aaKnown RBP4.57□□□□□ -1.68
SDCBP-205ENST00000447267 NME2P1O60361 137 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 ITGA10O75578 1167 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 SLC25A12O75746 678 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 HEXIM1O94992 359 aaKnown RBP4.57□□□□□ -1.68
SDCBP-205ENST00000447267 TGFAP01135 160 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 SETSIPP0DME0 302 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 PIM1P11309 404 aaPredicted RBP4.57□□□□□ -1.68
SDCBP-205ENST00000447267 LHCGRP22888 699 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 CTSSP25774 331 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 TEAD1P28347 426 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 EPHB2P29323 1055 aa4.57□□□□□ -1.68
SDCBP-205ENST00000447267 FMO4P31512 558 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms