RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ST6GALNAC3Q8NDV1 305 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 FAR1Q8WVX9 515 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 METTL21AQ8WXB1 218 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 ANKRD7Q92527 254 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 ERP44Q9BS26 406 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 DPH5Q9H2P9 285 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 AGPAT4Q9NRZ5 378 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 LANCL2Q9NS86 450 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 PLEKHB1Q9UF11 243 aaPredicted RBP19.58■□□□□ 0.72
SDC1-205ENST00000447124 SLC22A14Q9Y267 594 aa19.58■□□□□ 0.72
SDC1-205ENST00000447124 MTO1Q9Y2Z2 717 aaKnown RBP19.58■□□□□ 0.72
SDC1-205ENST00000447124 RAD51CO43502 376 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 WISP3O95389 354 aaPredicted RBP19.57■□□□□ 0.72
SDC1-205ENST00000447124 WDPCPO95876 746 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 ICAM2P13598 275 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 PWP1Q13610 501 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 MFSD4BQ5TF39 518 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 ANKRD53Q8N9V6 530 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 PLPP5Q8NEB5 264 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 SPATA4Q8NEY3 305 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 NT5CQ8TCD5 201 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 ANP32BQ92688 251 aaKnown RBP19.57■□□□□ 0.72
SDC1-205ENST00000447124 PEX11GQ96HA9 241 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 TSNARE1Q96NA8 513 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 RHOJQ9H4E5 214 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 DOPEY1Q5JWR5 2465 aa19.57■□□□□ 0.72
SDC1-205ENST00000447124 DYTNA2CJ06 578 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 PABPN1LA6NDY0 278 aaKnown RBP19.56■□□□□ 0.72
SDC1-205ENST00000447124 FAM187AA6NFU0 413 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 NDUFS4O43181 175 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 GALR3O60755 368 aaPredicted RBP19.56■□□□□ 0.72
SDC1-205ENST00000447124 DDAH2O95865 285 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 LDLRP01130 860 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 SERPIND1P05546 499 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 CYC1P08574 325 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 SLC35G6P0C7Q6 338 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 REEP5Q00765 189 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 RHAGQ02094 409 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 HYAL2Q12891 473 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 NXPE4Q6UWF7 544 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 C17orf53Q8N3J3 647 aaPredicted RBP19.56■□□□□ 0.72
SDC1-205ENST00000447124 BBOF1Q8ND07 529 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 PYROXD1Q8WU10 500 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 VPS39Q96JC1 886 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 TAAR6Q96RI8 345 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 RBCK1Q9BYM8 510 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 UNKQ9C0B0 810 aaKnown RBP19.56■□□□□ 0.72
SDC1-205ENST00000447124 AICDAQ9GZX7 198 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 SAYSD1Q9NPB0 183 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 STMN3Q9NZ72 180 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 GRHL1Q9NZI5 618 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 WHRNQ9P202 907 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 OARD1Q9Y530 152 aa19.56■□□□□ 0.72
SDC1-205ENST00000447124 CHST10O43529 356 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 CDC123O75794 336 aaPredicted RBP19.55■□□□□ 0.72
SDC1-205ENST00000447124 C1QAP02745 245 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 SMIM10L1P0DMW3 83 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 ALOX12P18054 663 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 GDF5P43026 501 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 OLR1P78380 273 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 CDKL1Q00532 357 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 C2orf54Q08AI8 447 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 HERC3Q15034 1050 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 TSNQ15631 228 aaKnown RBP19.55■□□□□ 0.72
SDC1-205ENST00000447124 DEFB134Q4QY38 66 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 ZNF324BQ6AW86 544 aaPredicted RBP19.55■□□□□ 0.72
SDC1-205ENST00000447124 PLAG1Q6DJT9 500 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 SPATA6LQ8N4H0 392 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 UTP15Q8TED0 518 aaKnown RBP19.55■□□□□ 0.72
SDC1-205ENST00000447124 TSLPQ969D9 159 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 SMIM10Q96HG1 83 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 KLHL31Q9H511 634 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 CAB39LQ9H9S4 337 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 PELI2Q9HAT8 420 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 CTNNAL1Q9UBT7 734 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 DYRK1BQ9Y463 629 aa19.55■□□□□ 0.72
SDC1-205ENST00000447124 DIDO1Q9BTC0 2240 aaKnown RBP19.55■□□□□ 0.72
SDC1-205ENST00000447124 TRAV17A0A0B4J275 112 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 A1L4Q6 167 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 A8MUI8 341 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 ZNF888P0CJ79 500 aaPredicted RBP19.54■□□□□ 0.72
SDC1-205ENST00000447124 AHRP35869 848 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 HNF4AP41235 474 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 GPX6P59796 221 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 ELOAQ14241 798 aaKnown RBP19.54■□□□□ 0.72
SDC1-205ENST00000447124 TRADDQ15628 312 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 BTBD16Q32M84 506 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 FCRLBQ6BAA4 426 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 H3F3CQ6NXT2 135 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 CREB3L4Q8TEY5 395 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 RHBDF1Q96CC6 855 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 NPAS2Q99743 824 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 SLX1AQ9BQ83 275 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 SLC6A16Q9GZN6 736 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 GPAMQ9HCL2 828 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 NSMCE4AQ9NXX6 385 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 C19orf25Q9UFG5 118 aaPredicted RBP19.54■□□□□ 0.72
SDC1-205ENST00000447124 SLC5A6Q9Y289 635 aa19.54■□□□□ 0.72
SDC1-205ENST00000447124 KCNE2Q9Y6J6 123 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms