RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MYCBPQ99417 103 aaPredicted RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 RHBGQ9H310 441 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 XKR8Q9H6D3 395 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 ZNF696Q9H7X3 374 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 TPT1P8Q9HAU6 139 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 MYNNQ9NPC7 610 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 AASDHPPTQ9NRN7 309 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 GOLGA4Q13439 2230 aaKnown RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 A0A1B0GTW7 788 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 FEZF1A0PJY2 475 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 CACNB4O00305 520 aaPredicted RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 FURINP09958 794 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 NELFEP18615 380 aaKnown RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 DRD1P21728 446 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 CLDN2P57739 230 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 TAS2R50P59544 299 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 PDE7AQ13946 482 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 C16orf72Q14CZ0 275 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 ADRM1Q16186 407 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 ANXA8L1Q5VT79 327 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 FAM71E1Q6IPT2 247 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 APLFQ8IW19 511 aaPredicted RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 DPH2Q9BQC3 489 aaPredicted RBP16.73■□□□□ 0.27
SMC6-206ENST00000446852 ADI1Q9BV57 179 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 OLAHQ9NV23 265 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 SCML1Q9UN30 329 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 CA5BQ9Y2D0 317 aa16.73■□□□□ 0.27
SMC6-206ENST00000446852 PRAMEF33A0A0G2JMD5 474 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 C2CD4DB7Z1M9 353 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 H3BQ06 376 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 RNASET2O00584 256 aaKnown RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 CCR8P51685 355 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 REEP5Q00765 189 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 GRSF1Q12849 480 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMC6-206ENST00000446852 COL19A1Q14993 1142 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 PRSS53Q2L4Q9 553 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 MPEG1Q2M385 716 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 TMEM92Q6UXU6 159 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 SLC9B2Q86UD5 537 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 VPS37AQ8NEZ2 397 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 MAGEE2Q8TD90 523 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 AIF1LQ9BQI0 150 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 ZNF717Q9BY31 904 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 BHLHE41Q9C0J9 482 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 PCBD2Q9H0N5 130 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 C8orf4Q9NR00 106 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 MAGED1Q9Y5V3 778 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 PLPP1O14494 284 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 TPP2P29144 1249 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 RPS9P46781 194 aaKnown RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 C2orf80Q0P641 193 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 MERTKQ12866 999 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 VMACQ2NL98 169 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 TMEM31Q5JXX7 168 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 MMP21Q8N119 569 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 RPLP0P6Q8NHW5 317 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 CIDECQ96AQ7 238 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 SCARF2Q96GP6 870 aaPredicted RBP16.72■□□□□ 0.27
SMC6-206ENST00000446852 MS4A8Q9BY19 250 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 CHST8Q9H2A9 424 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 PRDM8Q9NQV8 689 aa16.72■□□□□ 0.27
SMC6-206ENST00000446852 IGKV1-8A0A0C4DH67 115 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 ANKDD1BA6NHY2 528 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 PDZK1P1A8MUH7 402 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 H0Y8X5 98 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 PGM3O95394 542 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 ABCB1P08183 1280 aaPredicted RBP16.71■□□□□ 0.27
SMC6-206ENST00000446852 C7P10643 843 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 NDUFV2P19404 249 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 ACSL1P33121 698 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 RAB28P51157 221 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 IST1P53990 364 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 HBA1P69905 142 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 OTUD3Q5T2D3 398 aaPredicted RBP16.71■□□□□ 0.27
SMC6-206ENST00000446852 CPZQ66K79 652 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 USP30Q70CQ3 517 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 GALNT10Q86SR1 603 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 OR4A15Q8NGL6 344 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 ZFP90Q8TF47 636 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 F2RL3Q96RI0 385 aa16.71■□□□□ 0.27
SMC6-206ENST00000446852 SMPD3Q9NY59 655 aaPredicted RBP16.71■□□□□ 0.27
SMC6-206ENST00000446852 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
SMC6-206ENST00000446852 PRSS38A1L453 326 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 CCDC85CA6NKD9 419 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 RTCAO00442 366 aaKnown RBP16.71■□□□□ 0.26
SMC6-206ENST00000446852 CCNDBP1O95273 360 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 CST1P01037 141 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 IL3P08700 152 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 NUDT7P0C024 238 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 PKLRP30613 574 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 MRPS21P82921 87 aaKnown RBP16.71■□□□□ 0.26
SMC6-206ENST00000446852 UAP1L1Q3KQV9 507 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 SLC36A3Q495N2 470 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 LRRC23Q53EV4 343 aaPredicted RBP16.71■□□□□ 0.26
SMC6-206ENST00000446852 TPRG1LQ5T0D9 272 aa16.71■□□□□ 0.26
SMC6-206ENST00000446852 KHDRBS2Q5VWX1 349 aaKnown RBP16.71■□□□□ 0.26
SMC6-206ENST00000446852 KIAA1324Q6UXG2 1013 aaKnown RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms