RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SF3A2Q15428 464 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 USP41Q3LFD5 358 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 OR4F6Q8NGB9 312 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 NETO1Q8TDF5 533 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SNX33Q8WV41 574 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TTPALQ9BTX7 342 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ACOT13Q9NPJ3 140 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GFOD1Q9NXC2 390 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 FAAHO00519 579 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 JUPP14923 745 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ARF4P18085 180 aaPredicted RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 ZNF33BQ06732 778 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GINS1Q14691 196 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SPHARQ15513 63 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TCTEX1D2Q8WW35 142 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 NSUN3Q9H649 340 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 USP21Q9UK80 565 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 FZD4Q9ULV1 537 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 PRSS44E7EML9 344 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 RAB3BP20337 219 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 NDUFV1P49821 464 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 KCNC4Q03721 635 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SLC3A1Q07837 685 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 WDR83Q9BRX9 315 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 SEC14L3Q9UDX4 400 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 CHMP24386 653 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SLX4IPQ5VYV7 408 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 C15orf39Q6ZRI6 1047 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 RHCGQ9UBD6 479 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 PLIN4Q96Q06 1357 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 LOC100509620A0A075B734 347 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 H3BRB1 525 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 WNT9AO14904 365 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 RLN2P04090 185 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ACADMP11310 421 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TRIM23P36406 574 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 RPS14P62263 151 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 PTGES3Q15185 160 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 NDUFA9Q16795 377 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 DALRD3Q5D0E6 543 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 PRAMEF18Q5VWM3 479 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ISCA2Q86U28 154 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GPALPP1Q8IXQ4 340 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 YIPF6Q96EC8 236 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TM9SF2Q99805 663 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 DERL2Q9GZP9 239 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ERVK-19Q9WJR5 959 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 OR2A25A4D2G3 310 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 LMO2P25791 158 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 NEIL3Q8TAT5 605 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SGK2Q9HBY8 427 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GPSM3Q9Y4H4 160 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 LYRM1O43325 122 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 CTSHP09668 335 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SMSP52788 366 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 MC2RQ01718 297 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 BOP1Q14137 746 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 KCNN1Q92952 543 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 XYLT2Q9H1B5 865 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TLR5O60602 858 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ATP13A2Q9NQ11 1180 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GTF2IRD1Q9UHL9 959 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 DERAQ9Y315 318 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TRAPPC13A5PLN9 417 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GPR182O15218 404 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ACSL4O60488 711 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 SLC43A1O75387 559 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 GJB1P08034 283 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 IDUAP35475 653 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 FLYWCH1Q4VC44 716 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 APOBEC3FQ8IUX4 373 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 RPLP0P6Q8NHW5 317 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 CNTNAP3BQ96NU0 1288 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 DNTTIP1Q9H147 329 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 OIP5O43482 229 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 RGS9O75916 674 aaPredicted RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 PTGER3P43115 390 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 METTL2BQ6P1Q9 378 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 ASB8Q9H765 288 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 VPS29Q9UBQ0 182 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 CDC40O60508 579 aaKnown RBP eCLIP7.63□□□□□ -1.194e-9■■■□□ 15
SMG1-202ENST00000446231 PRKCAP17252 672 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ACVR2AP27037 513 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 RAB2AP61019 212 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 CHRNEQ04844 493 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 PUS10Q3MIT2 529 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 PARP15Q460N3 678 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 EIF5AL1Q6IS14 154 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 SMARCD3Q6STE5 483 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 UBE2R2Q712K3 238 aaPredicted RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 XAGE5Q8WWM1 108 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 USP7Q93009 1102 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 DOK1Q99704 481 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 MCMBPQ9BTE3 642 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 ADARB1P78563 741 aaKnown RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 ZNF630Q2M218 657 aaPredicted RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 UAP1L1Q3KQV9 507 aa7.63□□□□□ -1.19
SMG1-202ENST00000446231 TRIM43Q96BQ3 446 aaPredicted RBP7.63□□□□□ -1.19
SMG1-202ENST00000446231 RBM38Q9H0Z9 239 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms