RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 KIAA1191Q96A73 305 aa13.96□□□□□ -0.17
USE1-202ENST00000445667 TRIM44Q96DX7 344 aaPredicted RBP13.96□□□□□ -0.17
USE1-202ENST00000445667 ALG9Q9H6U8 611 aa13.96□□□□□ -0.17
USE1-202ENST00000445667 WWOXQ9NZC7 414 aa13.96□□□□□ -0.17
USE1-202ENST00000445667 TENM4Q6N022 2769 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 SCN3AQ9NY46 2000 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 NSG1A0A0A6YYJ2 146 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 HMX2A2RU54 273 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 KLHL41O60662 606 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 H2AFYO75367 372 aaKnown RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 ACSL3O95573 720 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 ZNF888P0CJ79 500 aaPredicted RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 ALOX12P18054 663 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 GNAZP19086 355 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 TFEBP19484 476 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 CRABP2P29373 138 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 ECHS1P30084 290 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 PHBP35232 272 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 AHRP35869 848 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 GGT5P36269 586 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 OLR1P78380 273 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 CDC16Q13042 620 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 HERC3Q15034 1050 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 PLEKHN1Q494U1 663 aaPredicted RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 MINDY4Q4G0A6 757 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 DEFB134Q4QY38 66 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 GLE1Q53GS7 698 aaKnown RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 TMEM205Q6UW68 189 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 SLCO4C1Q6ZQN7 724 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 NDUFAF7Q7L592 441 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 TBC1D1Q86TI0 1168 aaPredicted RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 ISCA2Q86U28 154 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 HPS6Q86YV9 775 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 TCAIMQ8N3R3 496 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 AFAP1L2Q8N4X5 818 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 Q8NA96 180 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 NT5CQ8TCD5 201 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 MIB2Q96AX9 1013 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 NXNL1Q96CM4 212 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 PEX11GQ96HA9 241 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 CYTH2Q99418 400 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 VN1R1Q9GZP7 353 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 LHPPQ9H008 270 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 CDC42EP4Q9H3Q1 356 aaKnown RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 KLHL31Q9H511 634 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 SLAMF7Q9NQ25 335 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 IGSF5Q9NSI5 407 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 DNAJC11Q9NVH1 559 aa13.95□□□□□ -0.18
USE1-202ENST00000445667 PTBP2Q9UKA9 531 aaKnown RBP13.95□□□□□ -0.18
USE1-202ENST00000445667 IGHV1-45A0A0A0MS14 117 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 IGHV3-20A0A0C4DH32 117 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 GALR3O60755 368 aaPredicted RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 PRAMEF4O60810 478 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 STK16O75716 305 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 IPO13O94829 963 aaKnown RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 SORBS2O94875 1100 aaKnown RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 CELA2AP08217 269 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 LTA4HP09960 611 aaKnown RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 RAB8AP61006 207 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 IRF9Q00978 393 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 HYAL2Q12891 473 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 SLBPQ14493 270 aaKnown RBP eCLIP13.94□□□□□ -0.18
USE1-202ENST00000445667 PRR30Q53SZ7 412 aaPredicted RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 CDKL4Q5MAI5 379 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 NUP210LQ5VU65 1888 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 AGAP7PQ5VUJ5 663 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 IRAK1BP1Q5VVH5 260 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 PRAMEF9Q5VWM5 478 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 IGFL3Q6UXB1 125 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 RELL1Q8IUW5 271 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 ZADH2Q8N4Q0 377 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 SNX31Q8N9S9 440 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 PDPRQ8NCN5 879 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 TRPV3Q8NET8 790 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 UHMK1Q8TAS1 419 aaKnown RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 STAG3L4Q8TBR4 150 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 CPT1CQ8TCG5 803 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 UTP15Q8TED0 518 aaKnown RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 CREB3L4Q8TEY5 395 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 KCTD4Q8WVF5 259 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 METTL21AQ8WXB1 218 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 PNPLA2Q96AD5 504 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 AGAP4Q96P64 663 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 FMO2Q99518 471 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 CAPS2Q9BXY5 557 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 RBCK1Q9BYM8 510 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 AICDAQ9GZX7 198 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 ACSS3Q9H6R3 686 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 CNOT10Q9H9A5 744 aaKnown RBP13.94□□□□□ -0.18
USE1-202ENST00000445667 NMRAL1Q9HBL8 299 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 ACOT9Q9Y305 439 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 ASB1Q9Y576 335 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 CSAG2Q9Y5P2 127 aa13.94□□□□□ -0.18
USE1-202ENST00000445667 LOC102723996A0A087X1L8 192 aa13.93□□□□□ -0.18
USE1-202ENST00000445667 SUPT3HB4E1H0 165 aa13.93□□□□□ -0.18
USE1-202ENST00000445667 UBXN8O00124 270 aa13.93□□□□□ -0.18
USE1-202ENST00000445667 CLGNO14967 610 aa13.93□□□□□ -0.18
USE1-202ENST00000445667 CHST10O43529 356 aa13.93□□□□□ -0.18
USE1-202ENST00000445667 CCNT2O60583 730 aaKnown RBP13.93□□□□□ -0.18
USE1-202ENST00000445667 SUPT3HO75486 399 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms