RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 PPP3R2Q96LZ3 170 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 QRFPRQ96P65 431 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 MAP3K3Q99759 626 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 NLNQ9BYT8 704 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 STRADBQ9C0K7 418 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 ZDHHC2Q9UIJ5 367 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 SRPK3Q9UPE1 567 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 RNF11Q9Y3C5 154 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 RP1P56715 2156 aa8.38□□□□□ -1.07
FXR1-203ENST00000445140 KRT87PA6NCN2 255 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 URADA6NGE7 173 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 DXOO77932 396 aaKnown RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 TBX6O95947 436 aaPredicted RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 CAPN1P07384 714 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 IL10P22301 178 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 GFERP55789 205 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TGM3Q08188 693 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 THEMIS2Q5TEJ8 643 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 PIGWQ7Z7B1 504 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ASPGQ86U10 573 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ZFAND4Q86XD8 727 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.37□□□□□ -1.07
FXR1-203ENST00000445140 METTL4Q8N3J2 472 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ZNF781Q8N8C0 355 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ANKRD53Q8N9V6 530 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 AGBL5Q8NDL9 886 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 PROKR1Q8TCW9 393 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TWIST2Q8WVJ9 160 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ZNF501Q96CX3 271 aaPredicted RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 CCDC74BQ96LY2 380 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 DPH2Q9BQC3 489 aaPredicted RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 FANCEQ9HB96 536 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 SRA1Q9HD15 236 aaKnown RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 TSR3Q9UJK0 312 aaKnown RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 USH1CQ9Y6N9 552 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 CAPN7Q9Y6W3 813 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 GPR179Q6PRD1 2367 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TRBV23OR9-2A0A075B6M9 112 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 CCDC187A0A096LP49 1063 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 IGHV5-51A0A0C4DH38 117 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 A0A1B0GTL3 188 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 CPED1A4D0V7 1026 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TCP11X1B4DZS4 312 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 RGS14O43566 566 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 CTSVO60911 334 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ULK1O75385 1050 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TROVE2P10155 538 aaKnown RBP eCLIP8.37□□□□□ -1.07
FXR1-203ENST00000445140 MAGP20916 626 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 MPSTP25325 297 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 HMOX2P30519 316 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ARSFP54793 590 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 CDH13P55290 713 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 STXBP1P61764 594 aaKnown RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 SKP1P63208 163 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ISXQ2M1V0 245 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 DEPDC1Q5TB30 811 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ZCCHC23Q6ZST2 131 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 IKBIPQ70UQ0 350 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TMPRSS9Q7Z410 1059 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 SPATA19Q7Z5L4 167 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 GALNT15Q8N3T1 639 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 METTL6Q8TCB7 284 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 NUDT22Q9BRQ3 303 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TBCDQ9BTW9 1192 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TRIM55Q9BYV6 548 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 SPNS1Q9H2V7 528 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TUBB1Q9H4B7 451 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 ZNF385DQ9H6B1 395 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 DDX31Q9H8H2 851 aaKnown RBP8.37□□□□□ -1.07
FXR1-203ENST00000445140 TMEM165Q9HC07 324 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 TNFRSF12AQ9NP84 129 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 GON4LQ3T8J9 2241 aa8.37□□□□□ -1.07
FXR1-203ENST00000445140 SLC9B1P1A6NJY1 282 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 H7BY64 318 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 SDHDO14521 159 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 GDF9O60383 454 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 FAM107AO95990 144 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 FTH1P19P0C7X4 201 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 RGS1Q08116 209 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 TBL3Q12788 808 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 KHDRBS2Q5VWX1 349 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 CGB2Q6NT52 195 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 IRGCQ6NXR0 463 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 LARP4Q71RC2 724 aaKnown RBP eCLIP8.36□□□□□ -1.07
FXR1-203ENST00000445140 TMPRSS7Q7RTY8 843 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 MCATQ8IVS2 390 aaKnown RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 OR2L5Q8NG80 312 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 HUS1BQ8NHY5 278 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 CHTF18Q8WVB6 975 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 NCSTNQ92542 709 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 C19orf60Q96EN9 201 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 PRAP1Q96NZ9 151 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 TGM7Q96PF1 710 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 ZNF717Q9BY31 904 aaPredicted RBP8.36□□□□□ -1.07
FXR1-203ENST00000445140 ELOVL6Q9H5J4 265 aa8.36□□□□□ -1.07
FXR1-203ENST00000445140 MLXIPLQ9NP71 852 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms