RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 CASP2P42575 452 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 YBX1P67809 324 aaKnown RBP11.65□□□□□ -0.54
LTBR-204ENST00000444814 CHIT1Q13231 466 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 SRSF6Q13247 344 aaKnown RBP11.65□□□□□ -0.54
LTBR-204ENST00000444814 DEFB109BQ30KR1 87 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 CCDC153Q494R4 210 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 LIPJQ5W064 366 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 TMEM214Q6NUQ4 689 aaKnown RBP11.65□□□□□ -0.54
LTBR-204ENST00000444814 MRPL14Q6P1L8 145 aaKnown RBP11.65□□□□□ -0.54
LTBR-204ENST00000444814 MED27Q6P2C8 311 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 MED25Q71SY5 747 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
LTBR-204ENST00000444814 MREGQ8N565 214 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 TEX9Q8N6V9 391 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 PTGR2Q8N8N7 351 aaPredicted RBP11.65□□□□□ -0.54
LTBR-204ENST00000444814 ADAMTS18Q8TE60 1221 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 RNF31Q96EP0 1072 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 WDR34Q96EX3 536 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 C10orf90Q96M02 699 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 ACSS2Q9NR19 701 aa11.65□□□□□ -0.54
LTBR-204ENST00000444814 MAP1BP46821 2468 aaKnown RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 CCDC151A5D8V7 595 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 SMIM23A6NLE4 172 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 H3BQF6 201 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 COPEO14579 308 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 ATXN7O15265 892 aaPredicted RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 RFPL1O75677 317 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 MYZAPP0CAP1 466 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 ALOX12P18054 663 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 JAK1P23458 1154 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 F8A1P23610 371 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 OTX2P32243 289 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 SLCO1A2P46721 670 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 OR1D4P47884 311 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 MEF2AQ02078 507 aaPredicted RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 PCDH1Q08174 1060 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 ASPHQ12797 758 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 SLC9A5Q14940 896 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 RBBP7Q16576 425 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 UBAP2Q5T6F2 1119 aaKnown RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 TRIM40Q6P9F5 258 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 CHSY3Q70JA7 882 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 VN1R4Q7Z5H5 301 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 CLEC1AQ8NC01 280 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 METTL21AQ8WXB1 218 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 GAL3ST3Q96A11 431 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 GPR78Q96P69 363 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 CRB3Q9BUF7 120 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 COPS7BQ9H9Q2 264 aaPredicted RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 GEMIN8Q9NWZ8 242 aaKnown RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 SENP1Q9P0U3 644 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 COPG2Q9UBF2 871 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 C19orf25Q9UFG5 118 aaPredicted RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.64□□□□□ -0.55
LTBR-204ENST00000444814 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 SH2B3Q9UQQ2 575 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 MRPS18BQ9Y676 258 aaKnown RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 MAU2Q9Y6X3 613 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 V9GYY5 206 aaPredicted RBP11.64□□□□□ -0.55
LTBR-204ENST00000444814 SPACA6W5XKT8 324 aa11.64□□□□□ -0.55
LTBR-204ENST00000444814 A0A0A6YYC8 382 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 I3L1I5 382 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 LCMT2O60294 686 aaKnown RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 NRP2O60462 931 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 OTCP00480 354 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 CAPN1P07384 714 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 HEXBP07686 556 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 MTHFD2P13995 350 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 MMP11P24347 488 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 ATP5F1P24539 256 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 VARSP26640 1264 aaKnown RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 GCAP28676 217 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 EEF1DP29692 281 aaKnown RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 CCNG1P51959 295 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 GTF2H2Q13888 395 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 DOC2AQ14183 400 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 NKG7Q16617 165 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 TBR1Q16650 682 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 ZXDCQ2QGD7 858 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 TMEM35AQ53FP2 167 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 GRHL2Q6ISB3 625 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 GTF2H2CQ6P1K8 395 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 METTL27Q8N6F8 245 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 CCDC63Q8NA47 563 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 ZCCHC10Q8TBK6 192 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 RDH11Q8TC12 318 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 STT3BQ8TCJ2 826 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 PHF21BQ96EK2 531 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 OR1F2PQ96R84 312 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 TGIF2Q9GZN2 237 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 STMN4Q9H169 189 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 EPB41L4BQ9H329 900 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 PIF1Q9H611 641 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 IPPKQ9H8X2 491 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 AKIRIN1Q9H9L7 192 aaPredicted RBP11.63□□□□□ -0.55
LTBR-204ENST00000444814 AHCTF1Q8WYP5 2266 aa11.63□□□□□ -0.55
LTBR-204ENST00000444814 IGLV3-12A0A075B6K2 115 aa11.62□□□□□ -0.55
LTBR-204ENST00000444814 VSTM2BA6NLU5 285 aa11.62□□□□□ -0.55
LTBR-204ENST00000444814 P2RX6O15547 441 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms