RNA–Protein interactions for RNA: ENST00000443785.5

PAXBP1-204, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-204ENST00000443785 NEIL2Q969S2 332 aa18.26■□□□□ 0.51
PAXBP1-204ENST00000443785 MRPL17Q9NRX2 175 aaKnown RBP18.26■□□□□ 0.51
PAXBP1-204ENST00000443785 ANTXRLA6NF34 631 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 TMEM221A6NGB7 291 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 WWP2O00308 870 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 LRRTM2O43300 516 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 GSTT2P0CG29 244 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 GSTT2BP0CG30 244 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 CYP2A7P20853 494 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 CD9P21926 228 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 EPHB3P54753 998 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 DAB2P98082 770 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 MXD1Q05195 221 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 PLEKHG7Q6ZR37 379 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 VANGL1Q8TAA9 524 aaPredicted RBP18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 WDR48Q8TAF3 677 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 CNDP2Q96KP4 475 aaKnown RBP18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 TSEN34Q9BSV6 310 aaKnown RBP18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 MAGIXQ9H6Y5 334 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 IMPAD1Q9NX62 359 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 INSL5Q9Y5Q6 135 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 CCL16O15467 120 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 CNOT3O75175 753 aaKnown RBP18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 SERPINB1P30740 379 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 SPINT3P49223 89 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 ST3GAL4Q11206 333 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 RFX4Q33E94 735 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 ARSIQ5FYB1 569 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 RNF130Q86XS8 419 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 LGI4Q8N135 537 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 GGHQ92820 318 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 SLC29A3Q9BZD2 475 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 MS4A12Q9NXJ0 267 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 RPS6KA6Q9UK32 745 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 DUSP12Q9UNI6 340 aa18.25■□□□□ 0.51
PAXBP1-204ENST00000443785 FADS2P1A8MWK0 482 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 CTDSP2O14595 271 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 NME6O75414 186 aaPredicted RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 ITGAMP11215 1152 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 TGM1P22735 817 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 CTSKP43235 329 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 ALDH9A1P49189 494 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 SNRPD1P62314 119 aaKnown RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 PPIGQ13427 754 aaKnown RBP eCLIP18.24■□□□□ 0.518e-7■■□□□ 11.8
PAXBP1-204ENST00000443785 RGNQ15493 299 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 TNFAIP8L2Q6P589 184 aaPredicted RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 C22orf39Q6P5X5 142 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 CBLL1Q75N03 491 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 EIF3MQ7L2H7 374 aaKnown RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 SPNS1Q9H2V7 528 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 GPATCH2Q9NW75 528 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 NDUFAF4Q9P032 175 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 LSM7Q9UK45 103 aaKnown RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 MAN2B2Q9Y2E5 1009 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 HCFC2Q9Y5Z7 792 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 OR2A25A4D2G3 310 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 WASHC1A8K0Z3 465 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 TEX28O15482 410 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 PSMA3P25788 255 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 MAGEA2P43356 314 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 GPR33Q49SQ1 333 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 ARMCX4Q5H9R4 360 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 SYT6Q5T7P8 510 aaPredicted RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 WASH2PQ6VEQ5 465 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 C11orf96Q7Z7L8 435 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 CELF2-AS1Q8N7Q2 184 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 CAPSLQ8WWF8 208 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 RAB8BQ92930 207 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 CCM2Q9BSQ5 444 aa18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 DNMT3AQ9Y6K1 912 aaPredicted RBP18.24■□□□□ 0.51
PAXBP1-204ENST00000443785 SCAMP1O15126 338 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 C9P02748 559 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 URODP06132 367 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 JUPP14923 745 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 NKX3-2P78367 333 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 GRIN2CQ14957 1233 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 KCNJ8Q15842 424 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 ZNF697Q5TEC3 545 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 WDR53Q7Z5U6 358 aaPredicted RBP18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 OR7G3Q8NG95 312 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 TCEAL4Q96EI5 215 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 C7orf34Q96L11 122 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 ITPAQ9BY32 194 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 ABCG4Q9H172 646 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 LEFTY1O75610 366 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 KLK1P06870 262 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 CHI3L1P36222 383 aaPredicted RBP18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 SLC6A12P48065 614 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 RAE1P78406 368 aaKnown RBP18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 ILF2Q12905 390 aaKnown RBP18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 PRSS53Q2L4Q9 553 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 TMEM53Q6P2H8 277 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 SERPINA11Q86U17 422 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 TSPYL5Q86VY4 417 aaPredicted RBP18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 ZNF675Q8TD23 568 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 SLC35A5Q9BS91 424 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 FAM83DQ9H4H8 585 aa18.23■□□□□ 0.51
PAXBP1-204ENST00000443785 IL21Q9HBE4 155 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms