RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 RDH11Q8TC12 318 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 PROKR1Q8TCW9 393 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 CRELD1Q96HD1 420 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 CCNL2Q96S94 520 aaPredicted RBP15.24■□□□□ 0.03
USP39-205ENST00000442708 SLC6A16Q9GZN6 736 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 PITHD1Q9GZP4 211 aaPredicted RBP15.24■□□□□ 0.03
USP39-205ENST00000442708 GSTO2Q9H4Y5 243 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 KLHL31Q9H511 634 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 TMBIM4Q9HC24 238 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 CPNE5Q9HCH3 593 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 SENP1Q9P0U3 644 aa15.24■□□□□ 0.03
USP39-205ENST00000442708 LAMA5O15230 3695 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 A0A0A6YYC8 382 aaPredicted RBP15.23■□□□□ 0.03
USP39-205ENST00000442708 I3L1I5 382 aaPredicted RBP15.23■□□□□ 0.03
USP39-205ENST00000442708 TXNDC9O14530 226 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 SUPT7LO94864 414 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 ONECUT2O95948 504 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 CXCR2P25025 360 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 HNRNPH1P31943 449 aaKnown RBP15.23■□□□□ 0.03
USP39-205ENST00000442708 ETV4P43268 484 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 PIK3CGP48736 1102 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 NAGLUP54802 743 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 RPS18P62269 152 aaKnown RBP15.23■□□□□ 0.03
USP39-205ENST00000442708 CLCQ05315 142 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 LAPTM5Q13571 262 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 DNASE1L3Q13609 305 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 PWP1Q13610 501 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 GARNL3Q5VVW2 1013 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 LIPJQ5W064 366 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 LRRC69Q6ZNQ3 347 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 SLC22A9Q8IVM8 553 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 LAS2Q8IYD9 372 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 AMER3Q8N944 861 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 CCDC63Q8NA47 563 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 TRPV3Q8NET8 790 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 OR7G3Q8NG95 312 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 OR9A4Q8NGU2 314 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 TRPC4APQ8TEL6 797 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 MECRQ9BV79 373 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 NTMT1Q9BV86 223 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 NLNQ9BYT8 704 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 RHBGQ9H310 441 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 ACTR8Q9H981 624 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 GPN2Q9H9Y4 310 aaPredicted RBP15.23■□□□□ 0.03
USP39-205ENST00000442708 ARGLU1Q9NWB6 273 aaPredicted RBP15.23■□□□□ 0.03
USP39-205ENST00000442708 OXSMQ9NWU1 459 aa15.23■□□□□ 0.03
USP39-205ENST00000442708 PTPRQQ9UMZ3 2332 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 NBEAQ8NFP9 2946 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 UBFD1O14562 309 aaKnown RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 FFAR3O14843 346 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 GPR42O15529 346 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 DNAJB6O75190 326 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 SERPINA6P08185 405 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 SLC35G6P0C7Q6 338 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 MYZAPP0CAP1 466 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 ZNF888P0CJ79 500 aaPredicted RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 IL1RNP18510 177 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 ALDH3A1P30838 453 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 HNF4AP41235 474 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 CCNG1P51959 295 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 DNAJB13P59910 316 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 RBBP7Q16576 425 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 CPSF6Q16630 551 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP39-205ENST00000442708 PAGE2BQ5JRK9 111 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 TOR1AIP1Q5JTV8 583 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 LETMD1Q6P1Q0 360 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 MED27Q6P2C8 311 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 SYVN1Q86TM6 617 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 MYLK4Q86YV6 388 aaPredicted RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 AFAP1L2Q8N4X5 818 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 CCNYL1Q8N7R7 359 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 ENDOVQ8N8Q3 282 aaKnown RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 OR4F6Q8NGB9 312 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 UTP15Q8TED0 518 aaKnown RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 ZNF473Q8WTR7 871 aaKnown RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 ARL8AQ96BM9 186 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 TLCD1Q96CP7 247 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 DPH2Q9BQC3 489 aaPredicted RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 DRC3Q9H069 523 aa15.22■□□□□ 0.03
USP39-205ENST00000442708 IQCGQ9H095 443 aaKnown RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 SSU72Q9NP77 194 aaKnown RBP15.22■□□□□ 0.03
USP39-205ENST00000442708 PCSK5Q92824 1860 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 MGAQ8IWI9 3026 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 ANKDD1BA6NHY2 528 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 C21orf140B9A014 251 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 UGDHO60701 494 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 CLEC3AO75596 197 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 SASH3O75995 380 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 CLDN9O95484 217 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 RAB40ALP0C0E4 278 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 SMIM10L1P0DMW3 83 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 PCNAP12004 261 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 AGXTP21549 392 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 PTPN4P29074 926 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 FAM53BQ14153 422 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 NCF4Q15080 339 aa15.21■□□□□ 0.03
USP39-205ENST00000442708 ZRSR2Q15696 482 aaKnown RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 HIST2H2ACQ16777 129 aaPredicted RBP15.21■□□□□ 0.03
USP39-205ENST00000442708 SYT16Q17RD7 645 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms