RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PYCR2Q96C36 320 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 LRRC39Q96DD0 335 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 TM4SF19Q96DZ7 209 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 SNF8Q96H20 258 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 PEX11GQ96HA9 241 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 TAAR6Q96RI8 345 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 UTP23Q9BRU9 249 aaKnown RBP11.11□□□□□ -0.63
TTC28-203ENST00000442232 RUBCNLQ9H714 662 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 ZFATQ9P243 1243 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 SH2B3Q9UQQ2 575 aa11.11□□□□□ -0.63
TTC28-203ENST00000442232 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 TRGV8A0A0C4DH27 118 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 MAGEB17A8MXT2 336 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 PSMD12O00232 456 aaPredicted RBP11.1□□□□□ -0.63
TTC28-203ENST00000442232 NDC80O14777 642 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 CDC123O75794 336 aaPredicted RBP11.1□□□□□ -0.63
TTC28-203ENST00000442232 CD46P15529 392 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 NPPBP16860 134 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 ALOX12P18054 663 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 SAT1P21673 171 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 ELK3P41970 407 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 TDGF1P3P51864 188 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 ARL4CP56559 192 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 OR4D2P58180 307 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 DR1Q01658 176 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 MEF2AQ02078 507 aaPredicted RBP11.1□□□□□ -0.63
TTC28-203ENST00000442232 PWP1Q13610 501 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
TTC28-203ENST00000442232 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 TMEM178AQ8NBL3 297 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 ABHD11Q8NFV4 315 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 OR56A3Q8NH54 315 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 SLC5A11Q8WWX8 675 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 FBXL8Q96CD0 374 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 EGFL8Q99944 293 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 COPG2Q9UBF2 871 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 VWA7Q9Y334 891 aa11.1□□□□□ -0.63
TTC28-203ENST00000442232 MYO7BQ6PIF6 2116 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 ITPR2Q14571 2701 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 ENO4A6NNW6 628 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 PRSS44E7EML9 344 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 FAM227AF5H4B4 570 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 HNRNPRO43390 633 aaKnown RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 LCMT2O60294 686 aaKnown RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 FHP07954 510 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 ZNF888P0CJ79 500 aaPredicted RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 GABRB3P28472 473 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 EEF1DP29692 281 aaKnown RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 AHRP35869 848 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 EFNA3P52797 238 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 TIAL1Q01085 375 aaKnown RBP eCLIP11.09□□□□□ -0.63
TTC28-203ENST00000442232 RHAGQ02094 409 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 OC90Q02509 493 aaPredicted RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 DEFB134Q4QY38 66 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 MSS51Q4VC12 460 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 HP1BP3Q5SSJ5 553 aaPredicted RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 TEDDM1Q5T9Z0 273 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 FCRLBQ6BAA4 426 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 STRA8Q7Z7C7 330 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 TMPRSS11BQ86T26 416 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 PDSS2Q86YH6 399 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 KLHL7Q8IXQ5 586 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 CYP4X1Q8N118 509 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 NKAPQ8N5F7 415 aaKnown RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 ZNF740Q8NDX6 193 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 TRPV3Q8NET8 790 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 NT5CQ8TCD5 201 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 RELTQ969Z4 430 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 TBC1D20Q96BZ9 403 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 VPS39Q96JC1 886 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 MAGED4Q96JG8 741 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 CAPZA3Q96KX2 299 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 TSNARE1Q96NA8 513 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 AIF1LQ9BQI0 150 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 SARGQ9BW04 601 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 PELI2Q9HAT8 420 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 MMP25Q9NPA2 562 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 TRMT1Q9NXH9 659 aaKnown RBP11.09□□□□□ -0.63
TTC28-203ENST00000442232 NSMCE4AQ9NXX6 385 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 SLC17A6Q9P2U8 582 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 ZFP69BQ9UJL9 534 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 ENTPD4Q9Y227 616 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 PCDHGB6Q9Y5F9 930 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 CREBBPQ92793 2442 aa11.09□□□□□ -0.63
TTC28-203ENST00000442232 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 ARHGAP10A1A4S6 786 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 NPEPPSL1A6NEC2 478 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 CCL21O00585 134 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 GALR3O60755 368 aaPredicted RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 TSPAN12O95859 305 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 RNH1P13489 461 aaKnown RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 SLC12A2P55011 1212 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 SLC26A5P58743 744 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 SNRPNP63162 240 aaKnown RBP11.08□□□□□ -0.64
TTC28-203ENST00000442232 REEP5Q00765 189 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 PMP22Q01453 160 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 MGAT5Q09328 741 aa11.08□□□□□ -0.64
TTC28-203ENST00000442232 ILF2Q12905 390 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms