RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TMEM178AQ8NBL3 297 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 ABHD11Q8NFV4 315 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 ADAMTS18Q8TE60 1221 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 NR4A3Q92570 626 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 CDKL2Q92772 493 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 RELTQ969Z4 430 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 MOCOSQ96EN8 888 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 LINGO1Q96FE5 620 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 IMMP1LQ96LU5 166 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 UTP23Q9BRU9 249 aaKnown RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 SGPP1Q9BX95 441 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 PITHD1Q9GZP4 211 aaPredicted RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 PELI2Q9HAT8 420 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 ZBTB20Q9HC78 741 aaPredicted RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 MMP25Q9NPA2 562 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 TXNDC16Q9P2K2 825 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 ERRFI1Q9UJM3 462 aaPredicted RBP7.35□□□□□ -1.23
CD44-211ENST00000442151 PDE10AQ9Y233 779 aa7.35□□□□□ -1.23
CD44-211ENST00000442151 IGKV1-8A0A0C4DH67 115 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 CYSRT1A8MQ03 144 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 A8MUI8 341 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 MAGEB17A8MXT2 336 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 LRRTM2O43300 516 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 HNRNPRO43390 633 aaKnown RBP7.34□□□□□ -1.23
CD44-211ENST00000442151 OR1F1O43749 312 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 AHSGP02765 367 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 SMSP52788 366 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 OR4D2P58180 307 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 STXBP1P61764 594 aaKnown RBP7.34□□□□□ -1.23
CD44-211ENST00000442151 CDKL1Q00532 357 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 ZNF33BQ06732 778 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 TGM3Q08188 693 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 DHX9Q08211 1270 aaKnown RBP7.34□□□□□ -1.23
CD44-211ENST00000442151 PCOLCEQ15113 449 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 NSDHLQ15738 373 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 TEDDM1Q5T9Z0 273 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 HECTD2Q5U5R9 776 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 FAAH2Q6GMR7 532 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 H3F3CQ6NXT2 135 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 PIWIL4Q7Z3Z4 852 aaKnown RBP7.34□□□□□ -1.23
CD44-211ENST00000442151 ZC3H7AQ8IWR0 971 aaKnown RBP7.34□□□□□ -1.23
CD44-211ENST00000442151 KRT78Q8N1N4 520 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 OR4K1Q8NGD4 311 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 OR9A4Q8NGU2 314 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 OR56A3Q8NH54 315 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 NT5CQ8TCD5 201 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 TBC1D20Q96BZ9 403 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 C8orf44Q96CB5 159 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 TSPAN17Q96FV3 270 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 SNF8Q96H20 258 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 SLC30A3Q99726 388 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 CNOT10Q9H9A5 744 aaKnown RBP7.34□□□□□ -1.23
CD44-211ENST00000442151 CHST11Q9NPF2 352 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 SEC14L3Q9UDX4 400 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 NUP210LQ5VU65 1888 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 CCDC88CQ9P219 2028 aa7.34□□□□□ -1.23
CD44-211ENST00000442151 CLDN4O14493 209 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 FCHO1O14526 889 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 MED26O95402 600 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ESRRAP11474 423 aaPredicted RBP7.34□□□□□ -1.24
CD44-211ENST00000442151 NPPBP16860 134 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ALOX12P18054 663 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 XCR1P46094 333 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 DR1Q01658 176 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 MGAT5Q09328 741 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 Q0VFX4 171 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ART3Q13508 389 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ZRSR2Q15696 482 aaKnown RBP7.34□□□□□ -1.24
CD44-211ENST00000442151 PHKG1Q16816 387 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ZNF766Q5HY98 468 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 CDKL4Q5MAI5 379 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ACER2Q5QJU3 275 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 HIBCHQ6NVY1 386 aaPredicted RBP7.34□□□□□ -1.24
CD44-211ENST00000442151 XKRXQ6PP77 449 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 FRA10AC1Q70Z53 315 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 MAATS1Q7Z4T9 603 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ANKRD37Q7Z713 158 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 SIRT6Q8N6T7 355 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 CATSPER1Q8NEC5 780 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 GIMAP7Q8NHV1 300 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 SLC5A11Q8WWX8 675 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 PSMF1Q92530 271 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 TMEM125Q96AQ2 219 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 FAR2Q96K12 515 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 SLX1AQ9BQ83 275 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 NPLQ9BXD5 320 aaPredicted RBP7.34□□□□□ -1.24
CD44-211ENST00000442151 VN1R1Q9GZP7 353 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ATG10Q9H0Y0 220 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 POPDC3Q9HBV1 291 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 PLA2G3Q9NZ20 509 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ZFATQ9P243 1243 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 COPG2Q9UBF2 871 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ZFP69BQ9UJL9 534 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 ENTPD4Q9Y227 616 aa7.34□□□□□ -1.24
CD44-211ENST00000442151 MRPS33Q9Y291 106 aaKnown RBP7.34□□□□□ -1.24
CD44-211ENST00000442151 KLF2Q9Y5W3 355 aaPredicted RBP7.34□□□□□ -1.24
CD44-211ENST00000442151 A1L4Q6 167 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 SGK494L7N484 410 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 CLGNO14967 610 aa7.33□□□□□ -1.24
CD44-211ENST00000442151 PRMT3O60678 531 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms