RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 LRRC70Q7Z2Q7 622 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 ARHGEF39Q8N4T4 335 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 DTWD1Q8N5C7 304 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 AMER3Q8N944 861 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 SLC44A1Q8WWI5 657 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 UBE2E3Q969T4 207 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 FAR2Q96K12 515 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 SMAD5Q99717 465 aaKnown RBP9.92□□□□□ -0.82
MCF2L-216ENST00000439475 MACROD1Q9BQ69 325 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 RHOXF2Q9BQY4 288 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 CCDC77Q9BR77 488 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 CD244Q9BZW8 370 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 VPS11Q9H270 941 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 EHD1Q9H4M9 534 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 SYNPO2LQ9H987 977 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 SNX15Q9NRS6 342 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 RIC8BQ9NVN3 520 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 FBXL4Q9UKA2 621 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 MKL2Q9ULH7 1088 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 NAALAD2Q9Y3Q0 740 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 ANGPTL3Q9Y5C1 460 aa9.92□□□□□ -0.82
MCF2L-216ENST00000439475 EXOC1LA0A1B0GW35 172 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 K7EPI3 171 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 SGK494L7N484 410 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ALOX12BO75342 701 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 CLEC3AO75596 197 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 KLHL18O94889 574 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 UQCRHP07919 91 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 SNRPAP09012 282 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 RBP1P09455 135 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 C8orf89P0DMQ9 161 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 COL6A2P12110 1019 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 GFAPP14136 432 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 NR1D1P20393 614 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 JAK1P23458 1154 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 VARSP26640 1264 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 XCR1P46094 333 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 AGTR2P50052 363 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 FOXL2P58012 376 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 MAT1AQ00266 395 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 TGM3Q08188 693 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 BMPR2Q13873 1038 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 SLBPQ14493 270 aaKnown RBP eCLIP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 PDK4Q16654 411 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 SYT16Q17RD7 645 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 TSNAXIP1Q2TAA8 658 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 XKR6Q5GH73 641 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 AGAP7PQ5VUJ5 663 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 SLCO4C1Q6ZQN7 724 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 NDUFAF7Q7L592 441 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 LAPTM4BQ86VI4 370 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 PARP9Q8IXQ6 854 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 KBTBD2Q8IY47 623 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ZADH2Q8N4Q0 377 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 EIF1ADQ8N9N8 165 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ZNF740Q8NDX6 193 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 OR11G2Q8NGC1 345 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 KCTD4Q8WVF5 259 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 CCT6BQ92526 530 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ESAMQ96AP7 390 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 PTCD3Q96EY7 689 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 AGAP4Q96P64 663 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 OR1F2PQ96R84 312 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ATOH8Q96SQ7 321 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 PAFAH2Q99487 392 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 TMEM79Q9BSE2 394 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 EFCAB11Q9BUY7 163 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 NUDT9Q9BW91 350 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 LHPPQ9H008 270 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ZNF552Q9H707 407 aaPredicted RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 SLAMF7Q9NQ25 335 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 IGSF5Q9NSI5 407 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 OPTCQ9UBM4 332 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ZNF180Q9UJW8 692 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 TMCO1Q9UM00 188 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 MRPS2Q9Y399 296 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 TNPO3Q9Y5L0 923 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 DSPP15924 2871 aaKnown RBP9.91□□□□□ -0.82
MCF2L-216ENST00000439475 CFAP47Q6ZTR5 3102 aa9.91□□□□□ -0.82
MCF2L-216ENST00000439475 ZFYVE26Q68DK2 2539 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TTLL8A6PVC2 850 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 K7EM74 188 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 UBXN8O00124 270 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 PSMD12O00232 456 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 FFAR3O14843 346 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 GPR42O15529 346 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ZZEF1O43149 2961 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 GALR3O60755 368 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 RDH16O75452 317 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 WFS1O76024 890 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ABHD2P08910 425 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 EPB42P16452 691 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ECHS1P30084 290 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 HNF4AP41235 474 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 KCNC4Q03721 635 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 TLE1Q04724 770 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 ACTN3Q08043 901 aaPredicted RBP9.9□□□□□ -0.82
MCF2L-216ENST00000439475 DLG1Q12959 904 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 CHIT1Q13231 466 aa9.9□□□□□ -0.82
MCF2L-216ENST00000439475 RAPSNQ13702 412 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms