RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SPATA18Q8TC71 538 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ATL1Q8WXF7 558 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ROBO4Q8WZ75 1007 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 HSD17B8Q92506 261 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 SPSB1Q96BD6 273 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 LRR1Q96L50 414 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 MUS81Q96NY9 551 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 FEVQ99581 238 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 KATNB1Q9BVA0 655 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 UTP14AQ9BVJ6 771 aaKnown RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 PFDN4Q9NQP4 134 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 MRGBPQ9NV56 204 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 COQ3Q9NZJ6 369 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 ANGPTL2Q9UKU9 493 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 C2CD2Q9Y426 696 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 CACNA1FO60840 1977 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 TRANK1O15050 2925 aa2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 IBTKQ9P2D0 1353 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P12-201ENST00000438745 A0A0G2JMZ2 1700 aa2.96□□□□□ -1.93
HMGB3P12-201ENST00000438745 SH3TC1Q8TE82 1336 aa2.96□□□□□ -1.93
HMGB3P12-201ENST00000438745 ZNF292O60281 2723 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 A0A087X002 238 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 LOC101059948A0A1B0GTJ6 334 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ARHGEF37A1IGU5 675 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 HHLA1C9JL84 531 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 CLDN4O14493 209 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 PTGESO14684 152 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF197O14709 1029 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC22A2O15244 555 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 PIGNO95427 931 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 NGFP01138 241 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 IGLV1-44P01699 117 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 LIFP15018 202 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 PDGFRAP16234 1089 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 EEF1B2P24534 225 aaKnown RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC6A6P31641 620 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 CEACAM8P31997 349 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 LHX1P48742 406 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 NPY4RP50391 375 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 UBASH3AP57075 661 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ITGA7Q13683 1181 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 CA9Q16790 459 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 HYAL4Q2M3T9 481 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 SPDYCQ5MJ68 293 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ARHGEF16Q5VV41 709 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 PRR27Q6MZM9 219 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF790Q6PG37 636 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 C15orf39Q6ZRI6 1047 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 DNAJB7Q7Z6W7 309 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 MYPOPQ86VE0 399 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF611Q8N823 705 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 MAPKAPK5-AS1Q8N8E1 139 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF485Q8NCK3 441 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 DHX58Q96C10 678 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 GBP5Q96PP8 586 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 RAD9AQ99638 391 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 CCDC3Q9BQI4 270 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC25A23Q9BV35 468 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 GTPBP2Q9BX10 602 aaKnown RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC2A11Q9BYW1 496 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 PRRG4Q9BZD6 226 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 LAT2Q9GZY6 243 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 FZD8Q9H461 694 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC52A3Q9NQ40 469 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 INTS10Q9NVR2 710 aaKnown RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 CHCHD3Q9NX63 227 aaKnown RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZDHHC2Q9UIJ5 367 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 NME7Q9Y5B8 376 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 LIPGQ9Y5X9 500 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 RPAP1Q9BWH6 1393 aaPredicted RBP2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 LTBP2Q14767 1821 aa2.96□□□□□ -1.94
HMGB3P12-201ENST00000438745 DUOX1Q9NRD9 1551 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 EIF5BO60841 1220 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 TBCAO75347 108 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 RECQL5O94762 991 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 GSRP00390 522 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 PROS1P07225 676 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 QDPRP09417 244 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MYOGP15173 224 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 CDH3P22223 829 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 CA4P22748 312 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 PTGER4P35408 488 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 NKX2-1P43699 371 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 RPL21P46778 160 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 TAF6P49848 677 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 ASCL1P50553 236 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MAT1AQ00266 395 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 SIGLEC14Q08ET2 396 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 TAF10Q12962 218 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 CUL3Q13618 768 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 ODF4Q2M2E3 257 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 KIAA1644Q3SXP7 199 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 UGT3A2Q3SY77 523 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 PARP10Q53GL7 1025 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM133BQ5BKY9 247 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 CYP4A22Q5TCH4 519 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MFSD14CQ5VZR4 134 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 CAVIN1Q6NZI2 390 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 TRAT1Q6PIZ9 186 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MFSD6Q6ZSS7 791 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms