RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 IGFBP4P22692 258 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 PIGAP37287 484 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TNFRSF4P43489 277 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 GZMMP51124 257 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 DPTQ07507 201 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 DNASE1L3Q13609 305 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TSTA3Q13630 321 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 DOC2AQ14183 400 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 C2orf27AQ580R0 203 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF773Q6PK81 442 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TMEM179BQ7Z7N9 219 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 CALHM3Q86XJ0 350 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 LMNTD1Q8N9Z9 388 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 ALPK1Q96QP1 1244 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 OR4K3Q96R72 315 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 PANX1Q96RD7 426 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 CCM2Q9BSQ5 444 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 SERGEFQ9UGK8 458 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TMED5Q9Y3A6 229 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 DOCK9Q9BZ29 2069 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 H0YAE9 185 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 H3BQ06 376 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 BCAS1O75363 584 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF682O95780 498 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 HTR1AP08908 422 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 PRPH2P23942 346 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 CTHP32929 405 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TMBIM6P55061 237 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 TAS2R38P59533 333 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 MEP1AQ16819 746 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 KIAA1211LQ6NV74 962 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 CLECL1Q8IZS7 167 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 SH3YL1Q96HL8 342 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 FUNDC2Q9BWH2 189 aa13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 STOX2Q9P2F5 926 aaPredicted RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 FAM32AQ9Y421 112 aaKnown RBP13.37□□□□□ -0.27
PTCHD3-201ENST00000438700 A0A1W2PP55 124 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 PSIP1O75475 530 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ETHE1O95571 254 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 RETP07949 1114 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 COX7A2P14406 83 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 HOXB9P17482 250 aaPredicted RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 AGXTP21549 392 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 HTR1BP28222 390 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ALDH4A1P30038 563 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 HPCAL1P37235 193 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 LAPTM4AQ15012 233 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 UGT8Q16880 541 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 DPY19L1Q2PZI1 675 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ZNF621Q6ZSS3 439 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 NEK10Q6ZWH5 1172 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 NLRP8Q86W28 1048 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 TRAPPC5Q8IUR0 188 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 HDDC3Q8N4P3 179 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 PLA2G15Q8NCC3 412 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 NELL1Q92832 810 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 FKBP10Q96AY3 582 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ZCCHC2Q9C0B9 1178 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 POLE4Q9NR33 117 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 VPS29Q9UBQ0 182 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ERVK-11Q9UQG0 969 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 PCDHGA8Q9Y5G5 932 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 IGLON5A6NGN9 336 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 FPGTO14772 594 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 HS6ST1O60243 411 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 PCDH8O95206 1070 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 CPSF4O95639 269 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ADH1BP00325 375 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 LSM3P62310 102 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 COL19A1Q14993 1142 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 OXA1LQ15070 435 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 LIPJQ5W064 366 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 ZCCHC8Q6NZY4 707 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 FAM9CQ8IZT9 166 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 SPARTQ8N0X7 666 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 GPR156Q8NFN8 814 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 WDR20Q8TBZ3 569 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 HPS1Q92902 700 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 REXO5Q96IC2 774 aaKnown RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 DPH2Q9BQC3 489 aaPredicted RBP13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 RAD21L1Q9H4I0 556 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 SGK2Q9HBY8 427 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 TMEM9Q9P0T7 183 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 CD207Q9UJ71 328 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 TSC22D4Q9Y3Q8 395 aa13.36□□□□□ -0.27
PTCHD3-201ENST00000438700 MAGEB17A8MXT2 336 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 NPC1O15118 1278 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 AQP9O43315 295 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 OXSR1O95747 527 aaPredicted RBP13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 ENGP17813 658 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 PRPS1L1P21108 318 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 C5AR1P21730 350 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 IMPA1P29218 277 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 RCVRNP35243 200 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 TPD52P55327 224 aaPredicted RBP13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 RAB15P59190 212 aa13.35□□□□□ -0.27
PTCHD3-201ENST00000438700 PPP2R2BQ00005 443 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms