RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SGK494L7N484 410 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 CLGNO14967 610 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 KLHL18O94889 574 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 BMP10O95393 424 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 ALOX12P18054 663 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 ITGA3P26006 1051 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 GSTM2P28161 218 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 SERPINB9P50453 376 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 DLG1Q12959 904 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 RAPSNQ13702 412 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 KLC3Q6P597 504 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 SLCO4C1Q6ZQN7 724 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 KRT78Q8N1N4 520 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 OR51Q1Q8NH59 317 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 RHEBL1Q8TAI7 183 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 EPN3Q9H201 632 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 EHD1Q9H4M9 534 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 MKL2Q9ULH7 1088 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 NFU1Q9UMS0 254 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 NAALAD2Q9Y3Q0 740 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 BAHCC1Q9P281 2608 aa23.42■■□□□ 1.34
RAPGEF1-206ENST00000438647 NUP210LQ5VU65 1888 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 A0A087WUV0 522 aaPredicted RBP23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 A0A096LPK6 155 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 HMX2A2RU54 273 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 SUPT3HB4E1H0 165 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 SUPT3HO75486 399 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 HPP00738 406 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 IL10P22301 178 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 VARSP26640 1264 aaKnown RBP23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 CSRP3P50461 194 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 SNRPNP63162 240 aaKnown RBP23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 TLE1Q04724 770 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 PDK4Q16654 411 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 UBAP2Q5T6F2 1119 aaKnown RBP23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 TMIGD1Q6UXZ0 262 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 LRRC70Q7Z2Q7 622 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 CENPLQ8N0S6 344 aaPredicted RBP23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 AFAP1L2Q8N4X5 818 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 SNX31Q8N9S9 440 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 ANKRD53Q8N9V6 530 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 KCTD4Q8WVF5 259 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 TM9SF4Q92544 642 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 NXNL1Q96CM4 212 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 MOCOSQ96EN8 888 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 SEC16BQ96JE7 1060 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 ATOH8Q96SQ7 321 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 PAFAH2Q99487 392 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 HCN3Q9P1Z3 774 aa23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 GCN1Q92616 2671 aaKnown RBP23.41■■□□□ 1.34
RAPGEF1-206ENST00000438647 RDH16O75452 317 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 KRT38O76015 456 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 SERPINA6P08185 405 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 CNTFP26441 200 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 GMPRP36959 345 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 MSH2P43246 934 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 XCR1P46094 333 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 SLBPQ14493 270 aaKnown RBP eCLIP23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 ACAP2Q15057 778 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 PDSS2Q86YH6 399 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 METTL21AQ8WXB1 218 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 CD244Q9BZW8 370 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 ZNF552Q9H707 407 aaPredicted RBP23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 NT5DC2Q9H857 520 aa23.4■■□□□ 1.34
RAPGEF1-206ENST00000438647 NSG1A0A0A6YYJ2 146 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 A0A1W2PQ72 361 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 CCNT2O60583 730 aaKnown RBP23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 GALR3O60755 368 aaPredicted RBP23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 KLHL2O95198 593 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 ALDOAP04075 364 aaKnown RBP23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 RHOXF2BP0C7M4 288 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 HPDP32754 393 aaPredicted RBP23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 KCNC1P48547 511 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 MINDY4Q4G0A6 757 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 DEFB134Q4QY38 66 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 FBXO48Q5FWF7 155 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 MFSD4BQ5TF39 518 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 TRMT10CQ7L0Y3 403 aaKnown RBP23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 NDUFAF7Q7L592 441 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 ESAMQ96AP7 390 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 C8orf44Q96CB5 159 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 OR1F2PQ96R84 312 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 RHOXF2Q9BQY4 288 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 TRIM4Q9C037 500 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 SLC6A16Q9GZN6 736 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 LHPPQ9H008 270 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 COPG2Q9UBF2 871 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZNF180Q9UJW8 692 aa23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 TNRC6AQ8NDV7 1962 aaKnown RBP23.39■■□□□ 1.33
RAPGEF1-206ENST00000438647 POC1B-GALNT4F8VUJ3 575 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 UBXN8O00124 270 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 MASP2O00187 686 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 ALOX12BO75342 701 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 ABHD2P08910 425 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 ZNF888P0CJ79 500 aaPredicted RBP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 C8orf89P0DMQ9 161 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 STXBP1P61764 594 aaKnown RBP23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 IRF9Q00978 393 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 PAGE2BQ5JRK9 111 aa23.38■■□□□ 1.33
RAPGEF1-206ENST00000438647 FAAH2Q6GMR7 532 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms