RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TRIM49CP0CI26 452 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 F3P13726 295 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 PSMB4P28070 264 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ALDH1B1P30837 517 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 OR3A2P47893 321 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 NPBWR1P48145 328 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CD151P48509 253 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 VEGFCP49767 419 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 LBX1P52954 281 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 DCDC1P59894 354 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 IRX1P78414 480 aaPredicted RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CETN1Q12798 172 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 E2F5Q15329 346 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 MPP7Q5T2T1 576 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ZC2HC1BQ5TFG8 222 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 TAF3Q5VWG9 929 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CNSTQ6PJW8 725 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CCDC73Q6ZRK6 1079 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 CPEB2Q7Z5Q1 589 aaKnown RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ANKRD46Q86W74 232 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 C10orf53Q8N6V4 93 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 SPC24Q8NBT2 197 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ATAD1Q8NBU5 361 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 SLCO2A1Q92959 643 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ITFG2Q969R8 447 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 EXOC4Q96A65 974 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 IWS1Q96ST2 819 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 PAIP2Q9BPZ3 127 aaKnown RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 MCRIP2Q9BUT9 160 aaKnown RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 DGCR6LQ9BY27 220 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 EGLN3Q9H6Z9 239 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 MTHFD2LQ9H903 347 aaPredicted RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 MED20Q9H944 212 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 COPS7BQ9H9Q2 264 aaPredicted RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 RPF1Q9H9Y2 349 aaKnown RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 PANK4Q9NVE7 773 aa3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 RBM28Q9NW13 759 aaKnown RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 ARMCX3Q9UH62 379 aaPredicted RBP3.28□□□□□ -1.88
LSM1P1-201ENST00000438629 A0A0B4J203 849 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 ERICH4A6NGS2 130 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 NKX6-3A6NJ46 265 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 SDR42E2A6NKP2 422 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 KBTBD13C9JR72 458 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 SLC1A7O00341 560 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 ZNF195O14628 629 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 CYTIPO60759 359 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 ZFAND5O76080 213 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 BAG3O95817 575 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 CD59P13987 128 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 SSTR1P30872 391 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 TLX1P31314 330 aaPredicted RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 LUMP51884 338 aaPredicted RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 CLDN17P56750 224 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 BPIFB3P59826 476 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 CSNK2BP67870 215 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 CDH18Q13634 790 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 PPA1Q15181 289 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 HSP90B2PQ58FF3 399 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 NHSL2Q5HYW2 709 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 KLHL10Q6JEL2 608 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 PLBD1Q6P4A8 553 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 IYDQ6PHW0 289 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 MEX3DQ86XN8 651 aaKnown RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 APCDD1Q8J025 514 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 NHLRC2Q8NBF2 726 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 NUP37Q8NFH4 326 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 TAF4BQ92750 862 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 MR1Q95460 341 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 SGF29Q96ES7 293 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 POM121L2Q96KW2 1035 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 FAM210AQ96ND0 272 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 IL12RB2Q99665 862 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 GPATCH1Q9BRR8 931 aaKnown RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 DESI2Q9BSY9 194 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 FGFBP2Q9BYJ0 223 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 WWTR1Q9GZV5 400 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 HOXD1Q9GZZ0 328 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 LSG1Q9H089 658 aaKnown RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 IARS2Q9NSE4 1012 aaKnown RBP3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 SLCO1C1Q9NYB5 712 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 HACD3Q9P035 362 aa3.27□□□□□ -1.89
LSM1P1-201ENST00000438629 RNF123Q5XPI4 1314 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 TRBV4-1A0A0J9YWV2 114 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 A8MVM7 634 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 PRSS46E5RG02 174 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 SCO2O43819 266 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 SELENOFO60613 162 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 IGHEP01854 428 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 MT-ND3P03897 115 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 CYP2A7P20853 494 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 PRKACGP22612 351 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 RBMS1P29558 406 aaKnown RBP3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 SOX3P41225 446 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 IER3P46695 156 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 TRPC1P48995 793 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 XGP55808 180 aa3.26□□□□□ -1.89
LSM1P1-201ENST00000438629 EVCP57679 992 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms