RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 KIF18AQ8NI77 898 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 LRRC15Q8TF66 581 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 SSMEM1Q8WWF3 244 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 MRPS27Q92552 414 aaKnown RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 TOMM40LQ969M1 308 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 MUS81Q96NY9 551 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 ANKRD2Q9GZV1 360 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 MED20Q9H944 212 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 SERINC1Q9NRX5 453 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 GKN1Q9NS71 199 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 ZNF701Q9NV72 531 aaPredicted RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 NDE1Q9NXR1 346 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 CPSF3Q9UKF6 684 aaKnown RBP2.53□□□□□ -2
HMGB1P31-201ENST00000437242 PADI2Q9Y2J8 665 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 TRIM17Q9Y577 477 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 LIPGQ9Y5X9 500 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 SBF2Q86WG5 1849 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 TUBGCP6Q96RT7 1819 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 IFT172Q9UG01 1749 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 NWD2Q9ULI1 1742 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 CLTCL1P53675 1640 aa2.53□□□□□ -2
HMGB1P31-201ENST00000437242 NEXMIFQ5QGS0 1516 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ABCC5O15440 1437 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 EEA1Q15075 1411 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 MTUS2Q5JR59 1369 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 TRPM3Q9HCF6 1732 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FMN2Q9NZ56 1722 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 A0A087WV48 116 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 A0A1W2PRQ8 180 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 NEMP2A6NFY4 417 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 SLCO2B1O94956 709 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 SIX3O95343 332 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 HSPA4LO95757 839 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ATP5BP06576 529 aaKnown RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 SAGP10523 405 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FOLR2P14207 255 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FDPSP14324 419 aaKnown RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 LHCGRP22888 699 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 IL4RP24394 825 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 PSMA3P25788 255 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 HSPA4P34932 840 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 LHX1P48742 406 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 B3GALT5-AS1P59052 145 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 POU5F1Q01860 360 aaKnown RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ACSM1Q08AH1 577 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 DMPKQ09013 629 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 CAMK2DQ13557 499 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 MTHFSDQ2M296 383 aaKnown RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 SYT14P1Q58G82 188 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ELFN2Q5R3F8 820 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 KIF6Q6ZMV9 814 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 Q6ZVH6 145 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 BTN2A1Q7KYR7 527 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ADCK2Q7Z695 626 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 NPEPL1Q8NDH3 523 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 OR13J1Q8NGT2 312 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 MAPK15Q8TD08 544 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 EXT2Q93063 718 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FAM162AQ96A26 154 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 SPSB1Q96BD6 273 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ZNF486Q96H40 463 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 ERO1AQ96HE7 468 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 SPATA17Q96L03 361 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FER1L6-AS2Q96M78 137 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 AGAP4Q96P64 663 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FNBP1Q96RU3 617 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 FEVQ99581 238 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 PANK2Q9BZ23 570 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 MYNNQ9NPC7 610 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 B3GAT1Q9P2W7 334 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 IQGAP3Q86VI3 1631 aa2.52□□□□□ -2.01
HMGB1P31-201ENST00000437242 PTCH1Q13635 1447 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 PEAK1Q9H792 1746 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 KIF15Q9NS87 1388 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 HCFC1P51610 2035 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 PCDH11YQ9BZA8 1340 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 TSPY2A6NKD2 308 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 ANXA2P2A6NMY6 339 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 O00370 1275 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 WDR46O15213 610 aaKnown RBP2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 EIF5BO60841 1220 aaKnown RBP2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 MELTFP08582 738 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 OR52Z1P0C646 297 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 GP9P14770 177 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 EPCAMP16422 314 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 IFNAR1P17181 557 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 GP5P40197 560 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 HLCSP50747 726 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 TPD52P55327 224 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 ROR1Q01973 937 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 GUCY2DQ02846 1103 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 CUL3Q13618 768 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 ITGA7Q13683 1181 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 ZNF273Q14593 569 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 TWISTNBQ3B726 338 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 C6orf136Q5SQH8 315 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 C20orf194Q5TEA3 1177 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 C11orf63Q6NUN7 778 aa2.51□□□□□ -2.01
HMGB1P31-201ENST00000437242 PET117Q6UWS5 81 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms