RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 ARNTP27540 789 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 COILP38432 576 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-213ENST00000436675 NUP107P57740 925 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 GPR85P60893 370 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 RPS15AP62244 130 aaKnown RBP13.88□□□□□ -0.19
HDAC8-213ENST00000436675 OLR1P78380 273 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 RELAQ04206 551 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 FOXD4Q12950 439 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-213ENST00000436675 SNX1Q13596 522 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 CUL1Q13616 776 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 CMPK2Q5EBM0 449 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 PEX26Q7Z412 305 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 SDCCAG8Q86SQ7 713 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-213ENST00000436675 SLC26A11Q86WA9 606 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 CCDC170Q8IYT3 715 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 LGI4Q8N135 537 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 MPP5Q8N3R9 675 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 UBL4BQ8N7F7 174 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC8-213ENST00000436675 PLPP5Q8NEB5 264 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 OR52N2Q8NGI0 321 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 ELP5Q8TE02 316 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 FOXC2Q99958 501 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 LACRTQ9GZZ8 138 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 DEFB127Q9H1M4 99 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 LANCL2Q9NS86 450 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 TMEM184CQ9NVA4 438 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 SH2B3Q9UQQ2 575 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 ZNF148Q9UQR1 794 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 EML6Q6ZMW3 1958 aa13.88□□□□□ -0.19
HDAC8-213ENST00000436675 FAM221AA4D161 298 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 A8MUA0 341 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 MAGEB17A8MXT2 336 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 H3BMM5 538 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 PEX1O43933 1283 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 LCMT2O60294 686 aaKnown RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 B4GALT2O60909 372 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 FTCDO95954 541 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 B3GALT4O96024 378 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 STIP1P31948 543 aaKnown RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 HLCSP50747 726 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 MLF1P58340 268 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 FOLH1Q04609 750 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 SNTB1Q13884 538 aaKnown RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 TYSND1Q2T9J0 566 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 MRNIPQ6NTE8 343 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 LRRC56Q8IYG6 542 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 POGLUT1Q8NBL1 392 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 CAMKVQ8NCB2 501 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 OR5M3Q8NGP4 307 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 OR10Q1Q8NGQ4 319 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 C1orf54Q8WWF1 131 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 MFSD3Q96ES6 412 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 PWWP2AQ96N64 755 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 CXXC4Q9H2H0 198 aa13.87□□□□□ -0.19
HDAC8-213ENST00000436675 TP63Q9H3D4 680 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 KLF13Q9Y2Y9 288 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 EPN1Q9Y6I3 576 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-213ENST00000436675 VPS13CQ709C8 3753 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 KLRC4-KLRK1H3BQV0 150 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 LIASO43766 372 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 KIF5CO60282 957 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 ESR1P03372 595 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 MGAT1P26572 445 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 IMPA1P29218 277 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 OASLQ15646 514 aaKnown RBP13.86□□□□□ -0.19
HDAC8-213ENST00000436675 KCTD19Q17RG1 926 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-213ENST00000436675 EMC4Q5J8M3 183 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 Q71RC1 249 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-213ENST00000436675 ASPGQ86U10 573 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 PRELID2Q8N945 189 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 RNF214Q8ND24 703 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 SLC13A3Q8WWT9 602 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 POLDIP3Q9BY77 421 aaKnown RBP13.86□□□□□ -0.19
HDAC8-213ENST00000436675 DEFB126Q9BYW3 111 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 SYBUQ9NX95 663 aa13.86□□□□□ -0.19
HDAC8-213ENST00000436675 REXO2Q9Y3B8 237 aaKnown RBP13.86□□□□□ -0.19
HDAC8-213ENST00000436675 NSD1Q96L73 2696 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-213ENST00000436675 JMJD1CQ15652 2540 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 KCNE1BA0A087WTH5 132 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 NPIPA2E9PIF3 369 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 NPIPA3F8WFD2 350 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 CHST10O43529 356 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 KLK8O60259 260 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 FHP07954 510 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 TBPL1P62380 186 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 BTG2P78543 158 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 HYAL2Q12891 473 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 RNF187Q5TA31 235 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-213ENST00000436675 ARHGAP11AQ6P4F7 1023 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 MDGA2Q7Z553 956 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 PCGF5Q86SE9 256 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 ZZZ3Q8IYH5 903 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 CLYBLQ8N0X4 340 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 CCDC89Q8N998 374 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 ACRBPQ8NEB7 543 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 OR5M9Q8NGP3 310 aa13.85□□□□□ -0.19
HDAC8-213ENST00000436675 GIMAP7Q8NHV1 300 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms