RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LHFPL2Q6ZUX7 228 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 NLRC3Q7RTR2 1065 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 TMPRSS7Q7RTY8 843 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 ZC3HC1Q86WB0 502 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 ZNF547Q8IVP9 402 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 NAXDQ8IW45 347 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 PRR18Q8N4B5 295 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 ZBTB2Q8N680 514 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 OR4C6Q8NH72 309 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC26A7Q8TE54 656 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 AENQ8WTP8 325 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 KCNJ9Q92806 393 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 INPP5DQ92835 1189 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 CAVIN3Q969G5 261 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 FAM136AQ96C01 138 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 CXorf40BQ96DE9 158 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 LRGUKQ96M69 825 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 C12orf66Q96MD2 445 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 FERD3LQ96RJ6 166 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 NDNQ99608 321 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 PRPF18Q99633 342 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 RBBP8Q99708 897 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 CDC6Q99741 560 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 BCL7BQ9BQE9 202 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 AARSD1Q9BTE6 412 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 KRTAP4-8Q9BYQ9 185 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 WDR12Q9GZL7 423 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 DRC3Q9H069 523 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 WWP1Q9H0M0 922 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 PLAC1Q9HBJ0 212 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 SYTL2Q9HCH5 934 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 PDE7BQ9NP56 450 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 RPRD1BQ9NQG5 326 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 C8orf4Q9NR00 106 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 UCKL1Q9NWZ5 548 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 NCKIPSDQ9NZQ3 722 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 SLAMF8Q9P0V8 285 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC17A6Q9P2U8 582 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 AASSQ9UDR5 926 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 FTSJ1Q9UET6 329 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC23A2Q9UGH3 650 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 FETUBQ9UGM5 382 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC39A10Q9ULF5 831 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 VWA7Q9Y334 891 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 HEBP2Q9Y5Z4 205 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 COLEC10Q9Y6Z7 277 aa5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 ZNF106Q9H2Y7 1883 aaKnown RBP5.98□□□□□ -1.45
ECHDC1-208ENST00000436638 UNC80Q8N2C7 3258 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 CPED1A4D0V7 1026 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 OR6C74A6NCV1 312 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SMIM23A6NLE4 172 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 RHPN2P1A8MT19 583 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SMAD7O15105 426 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SIGLEC6O43699 453 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SEC22BO75396 215 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 PIAS1O75925 651 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 KRT37O76014 449 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 UBOX5O94941 541 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 RPN2P04844 631 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 UBTFL6P0CB48 400 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 CBSLP0DN79 551 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 PF4V1P10720 104 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 F3P13726 295 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 ENO3P13929 434 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 PRKACBP22694 351 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 TGM1P22735 817 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 RPL10P27635 214 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 NDUFS1P28331 727 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 GABRB3P28472 473 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 CBSP35520 551 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 HSD17B3P37058 310 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 DIO1P49895 249 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 LIMK2P53671 638 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 POU4F1Q01851 419 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 EFTUD2Q15029 972 aaKnown RBP eCLIP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 NCF4Q15080 339 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 C14orf28Q4W4Y0 310 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 GKAP1Q5VSY0 366 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 CDCP2Q5VXM1 449 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 METRNLQ641Q3 311 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 KCTD16Q68DU8 428 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 RPUSD3Q6P087 351 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 BORAQ6PGQ7 559 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 IYDQ6PHW0 289 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 WASH2PQ6VEQ5 465 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 NAPRTQ6XQN6 538 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 MAMDC2Q7Z304 686 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 STX12Q86Y82 276 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 NRROSQ86YC3 692 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC25A45Q8N413 288 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 ARL14Q8N4G2 192 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 RAB42Q8N4Z0 105 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SIDT2Q8NBJ9 832 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 CFAP61Q8NHU2 1237 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 LKAAEAR1Q8TD35 194 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 MAGEC3Q8TD91 643 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 NAT6Q93015 286 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 C19orf60Q96EN9 201 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 SLC47A1Q96FL8 570 aa5.97□□□□□ -1.45
ECHDC1-208ENST00000436638 CEP19Q96LK0 163 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms