RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 COX6B1P14854 86 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CCND1P24385 295 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 EEF1DP29692 281 aaKnown RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CASP6P55212 293 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 SLC26A5P58743 744 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 DHX9Q08211 1270 aaKnown RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 HERC3Q15034 1050 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NSDHLQ15738 373 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 PHKG1Q16816 387 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 SFT2D3Q587I9 215 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 MFSD4BQ5TF39 518 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ZNF468Q5VIY5 522 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CAPN13Q6MZZ7 669 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 MYO7BQ6PIF6 2116 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 AGTRAPQ6RW13 159 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 SLC26A11Q86WA9 606 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ZNF227Q86WZ6 799 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CNTN4Q8IWV2 1026 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 RASGEF1CQ8N431 466 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NAT8LQ8N9F0 302 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TMEM178AQ8NBL3 297 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 MFSD9Q8NBP5 474 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 C2CD4AQ8NCU7 369 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TRIM58Q8NG06 486 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 OR4K1Q8NGD4 311 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CALML6Q8TD86 181 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 PHF10Q8WUB8 498 aaKnown RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 SLC13A3Q8WWT9 602 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 MAGED4Q96JG8 741 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 SIGLEC10Q96LC7 697 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 LPAR4Q99677 370 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 UTP23Q9BRU9 249 aaKnown RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 FAM167BQ9BTA0 163 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 RBCK1Q9BYM8 510 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 PARVBQ9HBI1 364 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 C20orf96Q9NUD7 363 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ANKRD10Q9NXR5 420 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NAALAD2Q9Y3Q0 740 aa10.29□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 IGKV3D-11A0A0A0MRZ8 115 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ZNF860A6NHJ4 632 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 GOLGA8MH3BSY2 632 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ADAM10O14672 748 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CEP104O60308 925 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NME2P1O60361 137 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CDC123O75794 336 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 KRT14P02533 472 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 FHP07954 510 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CD46P15529 392 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NPPBP16860 134 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NME2P22392 152 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 GABRB3P28472 473 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CXCR5P32302 372 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 SMSP52788 366 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TERF1P54274 439 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 RIPPLY3P57055 190 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ALDH6A1Q02252 535 aaKnown RBP10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NAE1Q13564 534 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 PWP1Q13610 501 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 CRYMQ14894 314 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TESK1Q15569 626 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 RNFT1Q5M7Z0 435 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 QSOX2Q6ZRP7 698 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 GALNTL5Q7Z4T8 443 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 FGD2Q7Z6J4 655 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 GALNT7Q86SF2 657 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 C17orf64Q86WR6 236 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 KIF2BQ8N4N8 673 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 OR5T3Q8NGG3 340 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 OR56A3Q8NH54 315 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 EEF1AKMT1Q8WVE0 214 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TBC1D20Q96BZ9 403 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 C14orf79Q96F83 325 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 PEX11GQ96HA9 241 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 OR4K3Q96R72 315 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 DMRTA2Q96SC8 542 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NDNQ99608 321 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ATG10Q9H0Y0 220 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TSPAN10Q9H1Z9 355 aaPredicted RBP10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 LZTFL1Q9NQ48 299 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 KLHL1Q9NR64 748 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 TRMT6Q9UJA5 497 aaKnown RBP10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 ASB1Q9Y576 335 aa10.28□□□□□ -0.76
SPTLC1P4-201ENST00000435997 NPIPA5E9PKD4 350 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 NDUFS4O43181 175 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 ASNA1O43681 348 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 DNAJB6O75190 326 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 SLC25A12O75746 678 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CLDN14O95500 239 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 SP1P08047 785 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 SNRPB2P08579 225 aaKnown RBP10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CCDC175P0C221 793 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 JAK1P23458 1154 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 TRHRP34981 398 aaPredicted RBP10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 KIR3DL1P43629 444 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CCR8P51685 355 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 CDKN2DP55273 166 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 HSP90AA5PQ58FG0 334 aa10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 RBM20Q5T481 1227 aaKnown RBP10.27□□□□□ -0.77
SPTLC1P4-201ENST00000435997 NIPAL1Q6NVV3 410 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms