RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZNF829Q3KNS6 432 aaPredicted RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 PAGE2BQ5JRK9 111 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 CATSPEREQ5SY80 951 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 C9orf50Q5SZB4 431 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 FAM109BQ6ICB4 259 aaPredicted RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 XKR5Q6UX68 686 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 TRAPPC5Q8IUR0 188 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 DRAXINQ8NBI3 349 aaPredicted RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 OR4A15Q8NGL6 344 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 GOT1L1Q8NHS2 421 aaPredicted RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.88■□□□□ 0.454e-19■■■■□ 21.2
CLK1-205ENST00000434813 BORCS5Q969J3 196 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 CSF3RQ99062 836 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 APOL4Q9BPW4 351 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 FUNDC2Q9BWH2 189 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 DMRT3Q9NQL9 472 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 ITM2CQ9NQX7 267 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 ADPRHL2Q9NX46 363 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 GALNT8Q9NY28 637 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 KIF17Q9P2E2 1029 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 NDRG4Q9ULP0 352 aaKnown RBP17.88■□□□□ 0.45
CLK1-205ENST00000434813 SH2B3Q9UQQ2 575 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 COQ6Q9Y2Z9 468 aa17.88■□□□□ 0.45
CLK1-205ENST00000434813 LRRK1Q38SD2 2015 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 MUC22E2RYF6 1773 aaPredicted RBP17.87■□□□□ 0.45
CLK1-205ENST00000434813 PIPSLA2A3N6 862 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 XPNPEP2O43895 674 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 BCL10O95999 233 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 C9P02748 559 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 METAP1P53582 386 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 GP2P55259 537 aaKnown RBP17.87■□□□□ 0.45
CLK1-205ENST00000434813 KCNJ10P78508 379 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 ZNF385BQ569K4 471 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 SLC16A12Q6ZSM3 486 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 TRIM74Q86UV6 250 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 CFAP206Q8IYR0 622 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 C11orf65Q8NCR3 313 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 NUS1Q96E22 293 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 LRRC3BQ96PB8 259 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 EPYCQ99645 322 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 DGCR6LQ9BY27 220 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 OR2AG1Q9H205 316 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 REEP4Q9H6H4 257 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 PRM3Q9NNZ6 103 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 KRT84Q9NSB2 600 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 SH3BP4Q9P0V3 963 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 WARS2Q9UGM6 360 aaKnown RBP17.87■□□□□ 0.45
CLK1-205ENST00000434813 ENPP5Q9UJA9 477 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 PADI2Q9Y2J8 665 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 GMPPBQ9Y5P6 360 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 PCM1Q15154 2024 aa17.87■□□□□ 0.45
CLK1-205ENST00000434813 NUP210Q8TEM1 1887 aaPredicted RBP17.87■□□□□ 0.45
CLK1-205ENST00000434813 PTGES3LE9PB15 166 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 SUV39H1O43463 412 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 FOXD2O60548 495 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 ADH1CP00326 375 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 C1GALT1C1LP0DN25 315 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 ZNF8P17098 575 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 HTR1BP28222 390 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 ELP6Q0PNE2 266 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 PDE7AQ13946 482 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 MOGQ16653 247 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLK1-205ENST00000434813 KIAA1614Q5VZ46 1190 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 COMMD6Q7Z4G1 85 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 CELF5Q8N6W0 485 aaKnown RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 TTC29Q8NA56 475 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 OR9A1PQ8NGU1 263 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 HSPBAP1Q96EW2 488 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 TPD52L3Q96J77 140 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 LINC00615Q96LM1 132 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 PITX2Q99697 317 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 DUSP21Q9H596 190 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 ATAD3AQ9NVI7 634 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 TPRKBQ9Y3C4 175 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 NUP214P35658 2090 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 ZNF99A8MXY4 864 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 K7ESM1 405 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 MVDP53602 400 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 SLC35A2P78381 396 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 IL1RL1Q01638 556 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 ARMCX6Q7L4S7 300 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 ANKRD13BQ86YJ7 626 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 LRRC56Q8IYG6 542 aaPredicted RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 FAR1Q8WVX9 515 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 MAL2Q969L2 176 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 ARRDC3Q96B67 414 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 CCDC90BQ9GZT6 254 aa17.86■□□□□ 0.45
CLK1-205ENST00000434813 MRPS23Q9Y3D9 190 aaKnown RBP17.86■□□□□ 0.45
CLK1-205ENST00000434813 TMEM229AB2RXF0 380 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 E9PQ18 207 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 INMTO95050 263 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 FMO3P31513 532 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 RPL3P39023 403 aaKnown RBP17.85■□□□□ 0.45
CLK1-205ENST00000434813 RXRGP48443 463 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 EMX1Q04741 257 aaPredicted RBP17.85■□□□□ 0.45
CLK1-205ENST00000434813 STARD3Q14849 445 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 RAET1GQ6H3X3 334 aa17.85■□□□□ 0.45
CLK1-205ENST00000434813 TSPYL5Q86VY4 417 aaPredicted RBP17.85■□□□□ 0.45
CLK1-205ENST00000434813 ETFBKMTQ8IXQ9 262 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms