RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TBC1D3GQ6DHY5 549 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PHACTR4Q8IZ21 702 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 MOSPD2Q8NHP6 518 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 DNAJA4Q8WW22 397 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 NEURL3Q96EH8 262 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 MS4A4EQ96PG1 132 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PKMYT1Q99640 499 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 COPS4Q9BT78 406 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 C12orf10Q9HB07 376 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SEC14L3Q9UDX4 400 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TRIM64CA6NLI5 447 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PDHA1P08559 390 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 UGT1A1P22309 533 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 XKP51811 444 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 VMACQ2NL98 169 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PLEKHG4Q58EX7 1191 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 XKR6Q5GH73 641 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF550Q7Z398 422 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TNS4Q8IZW8 715 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 DOK1Q99704 481 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TTYH2Q9BSA4 534 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 GABARAPL3Q9BY60 117 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CLMPQ9H6B4 373 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ING3Q9NXR8 418 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 A0A1W2PPC1 479 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 UBE2QL1A1L167 161 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ANGPTL1O95841 491 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CTSAP10619 480 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ATP1B2P14415 290 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 HOXD9P28356 352 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SF3B4Q15427 424 aaKnown RBP eCLIP3.64□□□□□ -1.835e-7■■□□□ 13.9
SHPRH-205ENST00000433355 USP39Q53GS9 565 aaKnown RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CERCAMQ5T4B2 595 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 IYDQ6PHW0 289 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PLEKHG7Q6ZR37 379 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 STK32CQ86UX6 486 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 LAS2Q8IYD9 372 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF454Q8N9F8 522 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 DRAXINQ8NBI3 349 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ARRDC2Q8TBH0 407 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC107Q8WV48 283 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 RAD9AQ99638 391 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 FNDC11Q9BVV2 318 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 NUAK2Q9H093 628 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 IGSF5Q9NSI5 407 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 C19orf25Q9UFG5 118 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TESQ9UGI8 421 aaKnown RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SLC22A31A6NKX4 558 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SEC24AO95486 1093 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PNMTP11086 282 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CPOXP36551 454 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 RAB14P61106 215 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ERVK-21P61565 698 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TRAM2Q15035 370 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 IRF4Q15306 451 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PLEKHN1Q494U1 663 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF628Q5EBL2 1059 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 KIAA0319Q5VV43 1072 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 LIN54Q6MZP7 749 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ARHGAP36Q6ZRI8 547 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 FTMTQ8N4E7 242 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 EDEM1Q92611 657 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 FOXJ1Q92949 421 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 FRMD6Q96NE9 622 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 FN3KQ9H479 309 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PIF1Q9H611 641 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SGK2Q9HBY8 427 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 MLXIPLQ9NP71 852 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ZC4H2Q9NQZ6 224 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ARL8BQ9NVJ2 186 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PAK1IP1Q9NWT1 392 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 A0A1W2PQH9 124 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 FAM170BA6NMN3 283 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ADM5C9JUS6 153 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TOX3O15405 576 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 NOS1APO75052 506 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SLC25A14O95258 325 aaPredicted RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CPNE6O95741 557 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 GOT2P00505 430 aaKnown RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 GSTT2BP0CG30 244 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 PEX2P28328 305 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 CMPK1P30085 196 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 GALNSP34059 522 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 STX4Q12846 297 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 DEFB115Q30KQ5 88 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 AGTRAPQ6RW13 159 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 WDR36Q8NI36 951 aaKnown RBP3.64□□□□□ -1.83
SHPRH-205ENST00000433355 RSPRY1Q96DX4 576 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 ABHD8Q96I13 439 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 MS4A4AQ96JQ5 239 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 COX4I2Q96KJ9 171 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 HRASLS5Q96KN8 279 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 TBATAQ96M53 351 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 BBS4Q96RK4 519 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 BBS2Q9BXC9 721 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 GSTO2Q9H4Y5 243 aa3.64□□□□□ -1.83
SHPRH-205ENST00000433355 SETD2Q9BYW2 2564 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TUBAL3A6NHL2 446 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LZTS3O60299 673 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 OR5F1O95221 314 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms