RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 VPS4AQ9UN37 437 aa14.25□□□□□ -0.13
DDX56-205ENST00000433257 FNDC3AQ9Y2H6 1198 aaKnown RBP14.25□□□□□ -0.13
DDX56-205ENST00000433257 YBX2Q9Y2T7 364 aaKnown RBP14.25□□□□□ -0.13
DDX56-205ENST00000433257 PCDHGB2Q9Y5G2 931 aa14.25□□□□□ -0.13
DDX56-205ENST00000433257 KCNK2O95069 426 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 TRBC1P01850 177 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 RPS5P46782 204 aaKnown RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 GATMP50440 423 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 LIMK1P53667 647 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 RPS24P62847 133 aaKnown RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 SELENOWP63302 87 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 BCL2L1Q07817 233 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 SMN1Q16637 294 aaKnown RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 SYT16Q17RD7 645 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 IFI44LQ53G44 452 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 ARMCX4Q5H9R4 360 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 CLLU1OSQ5K130 101 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 PLEKHS1Q5SXH7 462 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 DESI1Q6ICB0 168 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 C19orf48Q6RUI8 117 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 ANKS3Q6ZW76 656 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 UBE2R2Q712K3 238 aaPredicted RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 ANKRD46Q86W74 232 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 HEATR4Q86WZ0 1026 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 DENND1CQ8IV53 801 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 DCAF4L2Q8NA75 395 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 SIMC1Q8NDZ2 872 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 OR10G2Q8NGC3 310 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 PYCR2Q96C36 320 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 TRNT1Q96Q11 434 aaKnown RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 LYSMD1Q96S90 227 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 BARD1Q99728 777 aaKnown RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 SLC30A2Q9BRI3 323 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 YIPF2Q9BWQ6 316 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 TPT1P8Q9HAU6 139 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 POLE4Q9NR33 117 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 EVLQ9UI08 416 aaPredicted RBP14.24□□□□□ -0.13
DDX56-205ENST00000433257 POU2F3Q9UKI9 436 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.24□□□□□ -0.13
DDX56-205ENST00000433257 BTBD3Q9Y2F9 522 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 TRIOBPQ9H2D6 2365 aa14.24□□□□□ -0.13
DDX56-205ENST00000433257 CCRL2O00421 344 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SOX1O00570 391 aaPredicted RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 DSCR3O14972 297 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 AXIN1O15169 862 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SLITRK5O94991 958 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 ADORA3P0DMS8 318 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 CORO1AP31146 461 aaKnown RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 RRM2P31350 389 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 HNF4AP41235 474 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SLC15A1P46059 708 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 KCNJ10P78508 379 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 CXorf57Q6NSI4 855 aaKnown RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 NLRP8Q86W28 1048 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 RNF130Q86XS8 419 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 ZNF280BQ86YH2 543 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SNX29P2Q8IUI4 249 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 CCDC71Q8IV32 467 aaPredicted RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 SYTL1Q8IYJ3 562 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 HJURPQ8NCD3 748 aaPredicted RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 NUDT8Q8WV74 236 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 CAPSLQ8WWF8 208 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 TP53INP1Q96A56 240 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 APOLD1Q96LR9 279 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 Q96MT0 163 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 DUSP26Q9BV47 211 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 RC3H2Q9HBD1 1191 aaKnown RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 PCDH12Q9NPG4 1184 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 CLN6Q9NWW5 311 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SEC14L4Q9UDX3 406 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 DUSP12Q9UNI6 340 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 RWDD3Q9Y3V2 267 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 A0A1W2PQ67 120 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 LINC01553A4QN01 128 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 GAPDHSO14556 408 aaPredicted RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 SCN2BO60939 215 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 DDOSTP39656 456 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SEPHS1P49903 392 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 OR2B6P58173 313 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 FCHO2Q0JRZ9 810 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 MICAQ29983 383 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 IQCCQ4KMZ1 466 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 MEDAGQ5VYS4 303 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 PDE12Q6L8Q7 609 aaKnown RBP14.23□□□□□ -0.13
DDX56-205ENST00000433257 TPGS1Q6ZTW0 290 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 IL17RDQ8NFM7 739 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 LILRB4Q8NHJ6 448 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 GRPEL2Q8TAA5 225 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 TPD52L3Q96J77 140 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 COPS8Q99627 209 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 CHST8Q9H2A9 424 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 TMEM245Q9H330 911 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 ZNF576Q9H609 170 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 RMI1Q9H9A7 625 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 IL26Q9NPH9 171 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 VPS29Q9UBQ0 182 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 SLCO3A1Q9UIG8 710 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 FZD4Q9ULV1 537 aa14.23□□□□□ -0.13
DDX56-205ENST00000433257 PCDHGA2Q9Y5H1 932 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms