RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 C14orf166Q9Y224 244 aaKnown RBP14.93□□□□□ -0.02
PTPRF-206ENST00000429895 A0A1B0GVI7 797 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 HTR3EA5X5Y0 456 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 DPPA5A6NC42 116 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 FAM227AF5H4B4 570 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 GRID2O43424 1007 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 SLC6A4P31645 630 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 MLLT1Q03111 559 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-206ENST00000429895 WSCD2Q2TBF2 565 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 OR8K3Q8NH51 312 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 FCGR1BQ92637 280 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 TMBIM1Q969X1 311 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 TWNKQ96RR1 684 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 SEZ6LQ9BYH1 1024 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 STRADBQ9C0K7 418 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 SLC5A7Q9GZV3 580 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 ZDHHC2Q9UIJ5 367 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 TEX13DA0A0J9YY54 714 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-206ENST00000429895 ADH1BP00325 375 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 DAG1Q14118 895 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 PAMR1Q6UXH9 720 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF227Q86WZ6 799 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 ZSCAN1Q8NBB4 408 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 NINJ1Q92982 152 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 C17orf62Q9BQA9 187 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 SPATA6Q9NWH7 488 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-206ENST00000429895 LAMP5Q9UJQ1 280 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 ITGB1BP2Q9UKP3 347 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 PCDHB14Q9Y5E9 798 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 TIMM8BQ9Y5J9 83 aaPredicted RBP14.93□□□□□ -0.02
PTPRF-206ENST00000429895 CBSLP0DN79 551 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 CBSP35520 551 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 SCNN1AP37088 669 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 TMIGD1Q6UXZ0 262 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 KCTD9Q7L273 389 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF285Q96NJ3 590 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 GMEB1Q9Y692 573 aa14.93□□□□□ -0.02
PTPRF-206ENST00000429895 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 A0A0U1RQF3 1178 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 GSTM3P21266 225 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 DEFA5Q01523 94 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 LASP1Q14847 261 aaKnown RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 PON3Q15166 354 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 PTCHD3Q3KNS1 767 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OSTM1Q86WC4 334 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 KCNA7Q96RP8 456 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 CGREF1Q99674 301 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 HRASLS2Q9NWW9 162 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 POFUT2Q9Y2G5 429 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 PCDHGA10Q9Y5H3 936 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 FXYD6-FXYD2A0A087WZ82 144 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF30P17039 623 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 MERTKQ12866 999 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 MS4A13Q5J8X5 152 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TXNRD3NBQ6F5E7 133 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TPRG1Q6ZUI0 275 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 RNF130Q86XS8 419 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 DNAAF1Q8NEP3 725 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 IRF7Q92985 503 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 CD180Q99467 661 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 FXYD6Q9H0Q3 95 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 C14orf105Q9NVL8 296 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 KIAA1210Q9ULL0 1709 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 FAM221BA6H8Z2 402 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 METTL21EPA6NDL7 271 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OR2B6P58173 313 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 RPL6Q02878 288 aaKnown RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 AGTRAPQ6RW13 159 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TMCO2Q7Z6W1 182 aaPredicted RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TMCO6Q96DC7 493 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 MND1Q9BWT6 205 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TRIM64BA6NI03 449 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 M0QX08 132 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TLX2O43763 284 aaPredicted RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OAS1P00973 400 aaKnown RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 HTR1AP08908 422 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 MRPL3P09001 348 aaKnown RBP14.92□□□□□ -0.02
PTPRF-206ENST00000429895 UQCRC1P31930 480 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 ST3GAL3Q11203 375 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 ECH1Q13011 328 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TICAM1Q8IUC6 712 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OR56A1Q8NGH5 318 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OR8S1Q8NH09 359 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 SIX2Q9NPC8 291 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OAZ3Q9UMX2 235 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 IRF5Q13568 498 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 MTMR14Q8NCE2 650 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 TMEM41AQ96HV5 264 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 FBXL18Q96ME1 805 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 OR52B2Q96RD2 323 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 FBXL3Q9UKT7 428 aa14.92□□□□□ -0.02
PTPRF-206ENST00000429895 ENTPD6O75354 484 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 BOLLQ8N9W6 283 aaKnown RBP14.91□□□□□ -0.02
PTPRF-206ENST00000429895 OR9A1PQ8NGU1 263 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 STON2Q8WXE9 905 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF350Q9GZX5 532 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 GSKIPQ9P0R6 139 aa14.91□□□□□ -0.02
PTPRF-206ENST00000429895 PVALBP20472 110 aaPredicted RBP14.91□□□□□ -0.02
PTPRF-206ENST00000429895 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms