RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 USP9XQ93008 2570 aaPredicted RBP17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 LOC102723996A0A087X1L8 192 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 TBX6O95947 436 aaPredicted RBP17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 CELA2AP08217 269 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 SLC35G6P0C7Q6 338 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 ITGA3P26006 1051 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 AHRP35869 848 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 XCR1P46094 333 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 EEF1A2Q05639 463 aaKnown RBP17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 PWP1Q13610 501 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 MROH9Q5TGP6 573 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 ADNP2Q6IQ32 1131 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 TMEM205Q6UW68 189 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 IGFL3Q6UXB1 125 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 LRRN4CLQ8ND94 238 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 OR51Q1Q8NH59 317 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 CREB3L4Q8TEY5 395 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 MIB2Q96AX9 1013 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 ATOH8Q96SQ7 321 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 FAM129AQ9BZQ8 928 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 SLC6A16Q9GZN6 736 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 ALG9Q9H6U8 611 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 ZNF160Q9HCG1 818 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 MKL2Q9ULH7 1088 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 KCNE2Q9Y6J6 123 aa17.11■□□□□ 0.33
SSR4P1-202ENST00000429427 HECTD1Q9ULT8 2610 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 IGHV1-45A0A0A0MS14 117 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 KIF2AO00139 706 aaPredicted RBP17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 GALR3O60755 368 aaPredicted RBP17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 ACSL3O95573 720 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 HPP00738 406 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 TUBB4AP04350 444 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 ZNF888P0CJ79 500 aaPredicted RBP17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 TFEBP19484 476 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 CD22P20273 847 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 HSPA7P48741 367 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 PCOLCEQ15113 449 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 DEFB134Q4QY38 66 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 GLE1Q53GS7 698 aaKnown RBP17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 CDKL4Q5MAI5 379 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 LANCL3Q6ZV70 420 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 VN1R5Q7Z5H4 357 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 KIF18AQ8NI77 898 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 KCTD4Q8WVF5 259 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 PSMF1Q92530 271 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 EXT2Q93063 718 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 NXNL1Q96CM4 212 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 FMO2Q99518 471 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 RBCK1Q9BYM8 510 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 KLHL31Q9H511 634 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 ANKHQ9HCJ1 492 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 LANCL2Q9NS86 450 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 C5AR2Q9P296 337 aa17.1■□□□□ 0.33
SSR4P1-202ENST00000429427 MAP2K7O14733 419 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 DPM1O60762 260 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 SERPIND1P05546 499 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 C2P06681 752 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 HEXBP07686 556 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 SMIM10L1P0DMW3 83 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 C1GALT1C1LP0DN25 315 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 MTHFD2P13995 350 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 ALOX12P18054 663 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 CRABP2P29373 138 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 OLR1P78380 273 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 CDC16Q13042 620 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 SLBPQ14493 270 aaKnown RBP eCLIP17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 PLEKHN1Q494U1 663 aaPredicted RBP17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 SULT1C3Q6IMI6 304 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 RAPH1Q70E73 1250 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 UTP15Q8TED0 518 aaKnown RBP17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 SMIM10Q96HG1 83 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 GPR78Q96P69 363 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 CYTH2Q99418 400 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 AIF1LQ9BQI0 150 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 CLMPQ9H6B4 373 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 SNX15Q9NRS6 342 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 WWOXQ9NZC7 414 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 COPG2Q9UBF2 871 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 MTRF1LQ9UGC7 380 aaKnown RBP17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 RNF112Q9ULX5 631 aa17.09■□□□□ 0.33
SSR4P1-202ENST00000429427 RP1L1Q8IWN7 2480 aaPredicted RBP17.08■□□□□ 0.33
SSR4P1-202ENST00000429427 SHANK1Q9Y566 2161 aa17.08■□□□□ 0.33
SSR4P1-202ENST00000429427 IGHV3-20A0A0C4DH32 117 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 UBXN8O00124 270 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 KERAO60938 352 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 LTA4HP09960 611 aaKnown RBP17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 GNAZP19086 355 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 HNF4AP41235 474 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 AGTR2P50052 363 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 RAB8AP61006 207 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 KCNC4Q03721 635 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 HERC3Q15034 1050 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 RBBP5Q15291 538 aaKnown RBP17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 IGFL2Q6UWQ7 119 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 NDUFAF7Q7L592 441 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 TCAIMQ8N3R3 496 aa17.08■□□□□ 0.32
SSR4P1-202ENST00000429427 SLC44A1Q8WWI5 657 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms