RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 GPSM3Q9Y4H4 160 aa8.52□□□□□ -1.04
CDH13-202ENST00000428848 TNRC18O15417 2968 aaPredicted RBP8.52□□□□□ -1.05
CDH13-202ENST00000428848 POLR1CO15160 346 aaPredicted RBP8.52□□□□□ -1.05
CDH13-202ENST00000428848 ZW10O43264 779 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 AIREO43918 545 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 PRMT3O60678 531 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 LATS1O95835 1130 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 PRPS1L1P21108 318 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 GRK5P34947 590 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 SLC19A1P41440 591 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 RPIAP49247 311 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 SEPHS1P49903 392 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 C21orf58P58505 322 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 RHOAP61586 193 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 AP1S1P61966 158 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 KCNJ10P78508 379 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 TEKQ02763 1124 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 ELP6Q0PNE2 266 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 CHRNA6Q15825 494 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 SYT16Q17RD7 645 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 GPR33Q49SQ1 333 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 RTP2Q5QGT7 225 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 NOXRED1Q6NXP6 359 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 GALNT10Q86SR1 603 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 UBQLNLQ8IYU4 475 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 SLC22A15Q8IZD6 547 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 ADGRG2Q8IZP9 1017 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 METTL4Q8N3J2 472 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 TOR1AIP2Q8NFQ8 470 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 OR8J2Q8NGG1 315 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 CDADC1Q9BWV3 514 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 REXO4Q9GZR2 422 aaKnown RBP8.52□□□□□ -1.05
CDH13-202ENST00000428848 MKRN2Q9H000 416 aaKnown RBP8.52□□□□□ -1.05
CDH13-202ENST00000428848 RASSF1Q9NS23 344 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 KCTD5Q9NXV2 234 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 FCF1Q9Y324 198 aaKnown RBP8.52□□□□□ -1.05
CDH13-202ENST00000428848 AP1M2Q9Y6Q5 423 aa8.52□□□□□ -1.05
CDH13-202ENST00000428848 GLYATL1P3A0A0U1RQE8 302 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CDK2AP1O14519 115 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 FPGTO14772 594 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 SCAMP3O14828 347 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 LRATO95237 230 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CLDN7O95471 211 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CXCL10P02778 98 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CDK1P06493 297 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GABRB1P18505 474 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 POLR2CP19387 275 aaPredicted RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 GADD45AP24522 165 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 C21orf33P30042 268 aaPredicted RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 GGT2P36268 569 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ETV6P41212 452 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CTSKP43235 329 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 PRIM2P49643 509 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 OR2B6P58173 313 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 RACK1P63244 317 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 SRSF11Q05519 484 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 YIF1BQ5BJH7 314 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 COLEC12Q5KU26 742 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 SNAP47Q5SQN1 464 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GDPD3Q7L5L3 318 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 LURAP1LQ8IV03 231 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 NXPE1Q8N323 547 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 TCAIMQ8N3R3 496 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 FAM109AQ8N4B1 249 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 DNAJC22Q8N4W6 341 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ATG16L2Q8NAA4 619 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GGHQ92820 318 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 APOLD1Q96LR9 279 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 RIPOR3Q96MK2 946 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GDF15Q99988 308 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 COPS4Q9BT78 406 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 KLF16Q9BXK1 252 aaPredicted RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 SLC12A9Q9BXP2 914 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GON7Q9BXV9 100 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ELOVL6Q9H5J4 265 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GIMAP4Q9NUV9 329 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ADPRHL2Q9NX46 363 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CCDC59Q9P031 241 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 CLCA1A8K7I4 914 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ZBBXA8MT70 800 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 MAGEB17A8MXT2 336 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 GFRA2O00451 464 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 YY2O15391 372 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 EPN2O95208 641 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 YES1P07947 543 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 HMGA1P17096 107 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 AOAHP28039 575 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CLK1P49759 484 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 IRF3Q14653 427 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 HKDC1Q2TB90 917 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 PDE12Q6L8Q7 609 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 VN1R5Q7Z5H4 357 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 NATD1Q8N6N6 113 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 ZNF461Q8TAF7 563 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 CSGALNACT1Q8TDX6 532 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 MARVELD3Q96A59 401 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 VOPP1Q96AW1 172 aa8.51□□□□□ -1.05
CDH13-202ENST00000428848 C11orf24Q96F05 449 aaPredicted RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 TRMT2BQ96GJ1 504 aaKnown RBP8.51□□□□□ -1.05
CDH13-202ENST00000428848 ST6GAL2Q96JF0 529 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms