RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GPATCH11Q8N954 259 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 MDS2Q8NDY4 140 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 PLPP5Q8NEB5 264 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 AICDAQ9GZX7 198 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 TRMT1Q9NXH9 659 aaKnown RBP14.61□□□□□ -0.07
SEC13-210ENST00000428626 ANKRD10Q9NXR5 420 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 ARL15Q9NXU5 204 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 CHMP2BQ9UQN3 213 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 PSAT1Q9Y617 370 aa14.61□□□□□ -0.07
SEC13-210ENST00000428626 GOLGA6L10A0A0M3HER8 536 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 A0A1B0GUH1 482 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 CES2O00748 559 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 NDUFS4O43181 175 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 OR1F1O43749 312 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 GALR3O60755 368 aaPredicted RBP14.6□□□□□ -0.07
SEC13-210ENST00000428626 GUCA1CO95843 209 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 CCND1P24385 295 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 GRNP28799 593 aaKnown RBP14.6□□□□□ -0.07
SEC13-210ENST00000428626 CD96P40200 585 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 CCR8P51685 355 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 PER3P56645 1201 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 IL2P60568 153 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 PDAP1Q13442 181 aaKnown RBP14.6□□□□□ -0.07
SEC13-210ENST00000428626 ABRAXAS2Q15018 415 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 NSDHLQ15738 373 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 PPP1R3AQ16821 1122 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 DEFB134Q4QY38 66 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 ZNF766Q5HY98 468 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 STEAP4Q687X5 459 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 PALM2Q8IXS6 379 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 ITLN2Q8WWU7 325 aaPredicted RBP14.6□□□□□ -0.07
SEC13-210ENST00000428626 FBXL8Q96CD0 374 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 CFAP36Q96G28 342 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 HAUS8Q9BT25 410 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 KCNK13Q9HB14 408 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 C19orf25Q9UFG5 118 aaPredicted RBP14.6□□□□□ -0.07
SEC13-210ENST00000428626 VWA7Q9Y334 891 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 TEX264Q9Y6I9 313 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 PKDREJQ9NTG1 2253 aa14.6□□□□□ -0.07
SEC13-210ENST00000428626 TRBC2A0A5B9 178 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 ARHGAP10A1A4S6 786 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 USP27XA6NNY8 438 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 CHST10O43529 356 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 HIST1H2AGP0C0S8 130 aaPredicted RBP14.59□□□□□ -0.07
SEC13-210ENST00000428626 SLC35G6P0C7Q6 338 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 ZNF888P0CJ79 500 aaPredicted RBP14.59□□□□□ -0.07
SEC13-210ENST00000428626 ALOX12P18054 663 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 HIST1H2ADP20671 130 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 SCTRP47872 440 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 AGTR2P50052 363 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 AP1S2P56377 157 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 AP2B1P63010 937 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 BTG2P78543 158 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 HYAL2Q12891 473 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 ZNF460Q14592 562 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 USP10Q14694 798 aaKnown RBP14.59□□□□□ -0.07
SEC13-210ENST00000428626 ZNF468Q5VIY5 522 aaPredicted RBP14.59□□□□□ -0.07
SEC13-210ENST00000428626 SP5Q6BEB4 398 aaPredicted RBP14.59□□□□□ -0.07
SEC13-210ENST00000428626 SPINK14Q6IE38 97 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 KIF2BQ8N4N8 673 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 ANKRD53Q8N9V6 530 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 DNAJB8Q8NHS0 232 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 M1APQ8TC57 530 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 CCDC120Q96HB5 630 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 HIST1H2AHQ96KK5 128 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 ZNF354BQ96LW1 612 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 TSNARE1Q96NA8 513 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 HIST1H2AJQ99878 128 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 TRIM51Q9BSJ1 452 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 NAT9Q9BTE0 207 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 H2AFJQ9BTM1 129 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 KLHL31Q9H511 634 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 MMP25Q9NPA2 562 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 PPANQ9NQ55 473 aaKnown RBP14.59□□□□□ -0.07
SEC13-210ENST00000428626 SEC14L3Q9UDX4 400 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 ENTPD4Q9Y227 616 aa14.59□□□□□ -0.07
SEC13-210ENST00000428626 TRGV8A0A0C4DH27 118 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 MAGEB17A8MXT2 336 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 CDC7O00311 574 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 CRYABP02511 175 aaKnown RBP14.58□□□□□ -0.08
SEC13-210ENST00000428626 SERPIND1P05546 499 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 FHP07954 510 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 GRK3P35626 688 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 CA7P43166 264 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 SLC26A5P58743 744 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 REEP5Q00765 189 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 PWP1Q13610 501 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 FASTKD3Q14CZ7 662 aaKnown RBP14.58□□□□□ -0.08
SEC13-210ENST00000428626 HERC3Q15034 1050 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 C18orf21Q32NC0 220 aaPredicted RBP14.58□□□□□ -0.08
SEC13-210ENST00000428626 FAM45BPQ6NSW5 357 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 KLHL7Q8IXQ5 586 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 NT5CQ8TCD5 201 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 FAM45AQ8TCE6 357 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 UTP15Q8TED0 518 aaKnown RBP14.58□□□□□ -0.08
SEC13-210ENST00000428626 SLC5A11Q8WWX8 675 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 MARVELD3Q96A59 401 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 TBC1D20Q96BZ9 403 aa14.58□□□□□ -0.08
SEC13-210ENST00000428626 PDLIM5Q96HC4 596 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms