RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TTYH2Q9BSA4 534 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 FEM1AQ9BSK4 669 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF350Q9GZX5 532 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SIX2Q9NPC8 291 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SH3PXD2BA1X283 911 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 FAM149AA5PLN7 773 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PFKLP17858 780 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ENDOUP21128 410 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SLC6A6P31641 620 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 BDKRB1P46663 353 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 MALLQ13021 153 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GRM2Q14416 872 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ARL9Q6T311 187 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ARHGAP12Q8IWW6 846 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TFGQ92734 400 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 DEFB126Q9BYW3 111 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 LAMP5Q9UJQ1 280 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ZFR2Q9UPR6 939 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 KCNIP3Q9Y2W7 256 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 HEMK1Q9Y5R4 338 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 FAM170BA6NMN3 283 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 EFCAB9A8MZ26 197 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 C9IYK1 514 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 BCHEP06276 602 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 FBLP22087 321 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 MSX1P28360 303 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SEMA3AQ14563 771 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SF3B4Q15427 424 aaKnown RBP eCLIP8.67□□□□□ -1.021e-7■■■□□ 16.9
CTNND1-208ENST00000428599 TEAD2Q15562 447 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TMEM35AQ53FP2 167 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GPR153Q6NV75 609 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 THOC6Q86W42 341 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ZC3HC1Q86WB0 502 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 C9orf43Q8TAL5 461 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 CPT1BQ92523 772 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 OR8D2Q9GZM6 311 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GKN1Q9NS71 199 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 VNN3Q9NY84 501 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 IGSF9Q9P2J2 1179 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 MALT1Q9UDY8 824 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 CYP8B1Q9UNU6 501 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 KCNK6Q9Y257 313 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 CFAP20Q9Y6A4 193 aaKnown RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GRXCR1A8MXD5 290 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 DUX1O43812 170 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 EPCAMP16422 314 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TYRP1P17643 537 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PAX7P23759 505 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SLC15A1P46059 708 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PREPP48147 710 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SLC11A1P49279 550 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 ERVK-8P63133 956 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 MERTKQ12866 999 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PCBP2Q15366 365 aaKnown RBP eCLIP8.67□□□□□ -1.028e-9■■■■□ 26.6
CTNND1-208ENST00000428599 RALGPS1Q5JS13 557 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 C6orf52Q5T4I8 152 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SPAG16Q8N0X2 631 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TOMM5Q8N4H5 51 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 TMEM41AQ96HV5 264 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 CD180Q99467 661 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 NAA11Q9BSU3 229 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GNG8Q9UK08 70 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GPR34Q9UPC5 381 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PCDHB14Q9Y5E9 798 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PCDHGA2Q9Y5H1 932 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 FTCDNL1E5RQL4 147 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SASH3O75995 380 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 KLF8O95600 359 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 CYP11A1P05108 521 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PSKH1P11801 424 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SHMT2P34897 504 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 LACTB2Q53H82 288 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 SH3PXD2AQ5TCZ1 1133 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 Q6ZVU0 165 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 GRASPQ7Z6J2 395 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-208ENST00000428599 PCDHGA10Q9Y5H3 936 aa8.67□□□□□ -1.02
CTNND1-208ENST00000428599 A6NLC8 198 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 ZNF99A8MXY4 864 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-208ENST00000428599 B8ZZF3 427 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 KCNJ13O60928 360 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 IFNA2P01563 188 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 MT-ND1P03886 318 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 RPL10P27635 214 aaKnown RBP8.66□□□□□ -1.02
CTNND1-208ENST00000428599 RHEBQ15382 184 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 ADGRD1Q6QNK2 874 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.66□□□□□ -1.02
CTNND1-208ENST00000428599 POF1BQ8WVV4 589 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 P2RY13Q9BPV8 354 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 MLXQ9UH92 298 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 TMED5Q9Y3A6 229 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 A0A0G2JMP0 313 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-208ENST00000428599 C9JVG2 144 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 GSTM2P28161 218 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 GNRHRP30968 328 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 GATMP50440 423 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 NRLP54845 237 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 MTPNP58546 118 aa8.66□□□□□ -1.02
CTNND1-208ENST00000428599 RPS24P62847 133 aaKnown RBP8.66□□□□□ -1.02
CTNND1-208ENST00000428599 PMS2P3Q13401 168 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms