RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 VPS50Q96JG6 964 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ANKHQ9HCJ1 492 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 MKKSQ9NPJ1 570 aaPredicted RBP8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 MTRF1LQ9UGC7 380 aaKnown RBP8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PLAAQ9Y263 795 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SLC22A14Q9Y267 594 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PCDHGB7Q9Y5F8 929 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HELZ2Q9BYK8 2649 aaKnown RBP8.74□□□□□ -1.01
RFX3-AS1-202ENST00000427722 FIGNL2A6NMB9 653 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 KIF2AO00139 706 aaPredicted RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 JRKO75564 520 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 KLHL18O94889 574 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 NSA2O95478 260 aaKnown RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ACSL3O95573 720 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HPP00738 406 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HEXBP07686 556 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CD1DP15813 335 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 GDF5P43026 501 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SCTRP47872 440 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HNMTP50135 292 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CSRP3P50461 194 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ATP6V0D1P61421 351 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 RGS1Q08116 209 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 UAP1Q16222 522 aaPredicted RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 IGFBP7Q16270 282 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 MINDY4Q4G0A6 757 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PRR30Q53SZ7 412 aaPredicted RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 FBXO48Q5FWF7 155 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SLC6A19Q695T7 634 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 NXPE4Q6UWF7 544 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PDSS2Q86YH6 399 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SHISA5Q8N114 240 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 MMGT1Q8N4V1 131 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 RBMXL3Q8N7X1 1067 aaKnown RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 OR4K1Q8NGD4 311 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 IFT81Q8WYA0 676 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 NACC2Q96BF6 587 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 RHBDF1Q96CC6 855 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TRIM44Q96DX7 344 aaPredicted RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 MOCOSQ96EN8 888 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 FMO2Q99518 471 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SMAD5Q99717 465 aaKnown RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 AIF1LQ9BQI0 150 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TMEM79Q9BSE2 394 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CLMPQ9H6B4 373 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ALG9Q9H6U8 611 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PELI2Q9HAT8 420 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ZNF160Q9HCG1 818 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 NINJ2Q9NZG7 142 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CD274Q9NZQ7 290 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 DMGDHQ9UI17 866 aaKnown RBP8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 MKL2Q9ULH7 1088 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 KCNE2Q9Y6J6 123 aa8.73□□□□□ -1.01
RFX3-AS1-202ENST00000427722 NSG1A0A0A6YYJ2 146 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 H0YIG0 161 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 LILRA1O75019 489 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CDC123O75794 336 aaPredicted RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 IPO13O94829 963 aaKnown RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SORBS2O94875 1100 aaKnown RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 BMP10O95393 424 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 B3GALT4O96024 378 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 S100BP04271 92 aaPredicted RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ZNF888P0CJ79 500 aaPredicted RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SLC35E2BP0CK96 405 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 COX6A1P12074 109 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TFEBP19484 476 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CXCR2P25025 360 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PHBP35232 272 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HNF4AP41235 474 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 XCR1P46094 333 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SLC6A12P48065 614 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HSPA7P48741 367 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CD97P48960 835 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 EFNA3P52797 238 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 OLR1P78380 273 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 RELBQ01201 579 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CDC16Q13042 620 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 PWP1Q13610 501 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SLBPQ14493 270 aaKnown RBP eCLIP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 HERC3Q15034 1050 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 RBBP5Q15291 538 aaKnown RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 DEFB134Q4QY38 66 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 CEP128Q6ZU80 1094 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TBC1D1Q86TI0 1168 aaPredicted RBP8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TCAIMQ8N3R3 496 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SNX31Q8N9S9 440 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ANKRD53Q8N9V6 530 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 OR51Q1Q8NH59 317 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 KIF18AQ8NI77 898 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TM9SF4Q92544 642 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 ESAMQ96AP7 390 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TM4SF19Q96DZ7 209 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 SARGQ9BW04 601 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 FAM129AQ9BZQ8 928 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 TGIF2Q9GZN2 237 aa8.72□□□□□ -1.01
RFX3-AS1-202ENST00000427722 VN1R1Q9GZP7 353 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms