RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 TBC1D19Q8N5T2 526 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 CAMKVQ8NCB2 501 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 OR11G2Q8NGC1 345 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 ZCCHC10Q8TBK6 192 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 FBXO25Q8TCJ0 367 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 TSPAN17Q96FV3 270 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 PDLIM5Q96HC4 596 aaKnown RBP12.05□□□□□ -0.48
SGCE-203ENST00000425444 TSNARE1Q96NA8 513 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 POPDC3Q9HBV1 291 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 MKKSQ9NPJ1 570 aaPredicted RBP12.05□□□□□ -0.48
SGCE-203ENST00000425444 SMYD2Q9NRG4 433 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 CTNNAL1Q9UBT7 734 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 IKZF3Q9UKT9 509 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
SGCE-203ENST00000425444 DYRK1BQ9Y463 629 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 COL6A5A8TX70 2615 aa12.05□□□□□ -0.48
SGCE-203ENST00000425444 IGLV3-12A0A075B6K2 115 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 TCRBV9S1A1TA0A576 114 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 CXorf49A8MYA2 514 aaPredicted RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 IDSB3KWA1 339 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 NDUFS4O43181 175 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 FOXS1O43638 330 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 OR1F1O43749 312 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 URI1O94763 535 aaPredicted RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 SERPIND1P05546 499 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 UQCRHP07919 91 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 NPPBP16860 134 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 IL1RNP18510 177 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 SLC26A3P40879 764 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 EMP2P54851 167 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 KRTAP10-9P60411 292 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 MAT1AQ00266 395 aaKnown RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 POU4F1Q01851 419 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 MEF2AQ02078 507 aaPredicted RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 EEF1A2Q05639 463 aaKnown RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 CBLBQ13191 982 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 FAM53BQ14153 422 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 CSHL1Q14406 222 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 USP10Q14694 798 aaKnown RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 TSNQ15631 228 aaKnown RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 PPP1R3AQ16821 1122 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 SYT16Q17RD7 645 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 FAAH2Q6GMR7 532 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 C3orf62Q6ZUJ4 267 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 TMPRSS11BQ86T26 416 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 CEP97Q8IW35 865 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 ZADH2Q8N4Q0 377 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 AMER3Q8N944 861 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 OR9A4Q8NGU2 314 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 OR56A3Q8NH54 315 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 SLC13A3Q8WWT9 602 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 SLC5A11Q8WWX8 675 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 ZNF592Q92610 1267 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 C8orf44Q96CB5 159 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 CPNE1Q99829 537 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 MACROD1Q9BQ69 325 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 FAM129AQ9BZQ8 928 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 PHACTR1Q9C0D0 580 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 ZNF552Q9H707 407 aaPredicted RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 ZNF160Q9HCG1 818 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 ANKHQ9HCJ1 492 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 HCN3Q9P1Z3 774 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 MTO1Q9Y2Z2 717 aaKnown RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 MRPS2Q9Y399 296 aaKnown RBP12.04□□□□□ -0.48
SGCE-203ENST00000425444 OARD1Q9Y530 152 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 PCM1Q15154 2024 aa12.04□□□□□ -0.48
SGCE-203ENST00000425444 CCDC88CQ9P219 2028 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 HEATR5BQ9P2D3 2071 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 NSG1A0A0A6YYJ2 146 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 NCF1BA6NI72 391 aaPredicted RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 NCF1CA8MVU1 366 aaPredicted RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 H0YIG0 161 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 E2F3O00716 465 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 NSA2O95478 260 aaKnown RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 STSP08842 583 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 GSTA2P09210 222 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 EDN3P14138 238 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 NCF1P14598 390 aaPredicted RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 STMN1P16949 149 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 SSTR2P30874 369 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 STX2P32856 288 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 GP5P40197 560 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 SOX8P57073 446 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 MINDY4Q4G0A6 757 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 CATSPEREQ5SY80 951 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 IGFL3Q6UXB1 125 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 Q6ZS92 163 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 ZNF572Q7Z3I7 529 aaPredicted RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 THOC6Q86W42 341 aaKnown RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 ZC3H7AQ8IWR0 971 aaKnown RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 ZNF295-AS1Q8N0V1 137 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 ARHGEF39Q8N4T4 335 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 PPM1NQ8N819 430 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 MFSD9Q8NBP5 474 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 ABHD11Q8NFV4 315 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 ANKRD49Q8WVL7 239 aa12.03□□□□□ -0.48
SGCE-203ENST00000425444 ITLN2Q8WWU7 325 aaPredicted RBP12.03□□□□□ -0.48
SGCE-203ENST00000425444 ANKRD7Q92527 254 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms