RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 C19orf25Q9UFG5 118 aaPredicted RBP7.61□□□□□ -1.19
VIM-202ENST00000421459 PDE10AQ9Y233 779 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ZGRF1Q86YA3 2104 aa7.61□□□□□ -1.19
VIM-202ENST00000421459 ZNF469Q96JG9 3925 aaPredicted RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 POLQO75417 2590 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 KCNE1BA0A087WTH5 132 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 A0A1B0GTH9 108 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 NKX2-6A6NCS4 301 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 ZNF839A8K0R7 811 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 PFDN6O15212 129 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 CHST10O43529 356 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 SLC25A12O75746 678 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 PDE9AO76083 593 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 SERPIND1P05546 499 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 MPC1LP0DKB6 136 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 MYBL2P10244 700 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 NPPBP16860 134 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 TPSB2P20231 275 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 AGAP20933 346 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 SSTR2P30874 369 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 HNF4AP41235 474 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 SLC1A2P43004 574 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 AGTR2P50052 363 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 AP2B1P63010 937 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 HYAL2Q12891 473 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 GPS1Q13098 491 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 THOC5Q13769 683 aaKnown RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 TPSAB1Q15661 275 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 EXT1Q16394 746 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 PHKG1Q16816 387 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 DEFB134Q4QY38 66 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 KRTCAP3Q53RY4 240 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 CAPN13Q6MZZ7 669 aaPredicted RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 TTC27Q6P3X3 843 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 DRICH1Q6PGQ1 229 aaPredicted RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 AGTRAPQ6RW13 159 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 C16orf47Q6ZP98 133 aaPredicted RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 RPS19BP1Q86WX3 136 aaKnown RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 RNF10Q8N5U6 811 aaKnown RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 CAMKVQ8NCB2 501 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 PLPP5Q8NEB5 264 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 MCOLN3Q8TDD5 553 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 ELP5Q8TE02 316 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 NRGNQ92686 78 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 EBNA1BP2Q99848 306 aaKnown RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 SPNS1Q9H2V7 528 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 RHBGQ9H310 441 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 GPAMQ9HCL2 828 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 C20orf96Q9NUD7 363 aaPredicted RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 INTS10Q9NVR2 710 aaKnown RBP7.6□□□□□ -1.19
VIM-202ENST00000421459 PPT2Q9UMR5 302 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 PCDHGB6Q9Y5F9 930 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 SVILO95425 2214 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 MYO7BQ6PIF6 2116 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 CPAMD8Q8IZJ3 1885 aa7.6□□□□□ -1.19
VIM-202ENST00000421459 MYOCOSA0A1B0GUC4 107 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 MAGEB17A8MXT2 336 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 C4orf51C9J302 202 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 AP3B1O00203 1094 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 NDUFS4O43181 175 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 OR1F1O43749 312 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 HS6ST1O60243 411 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 CEP104O60308 925 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 NME2P1O60361 137 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 CDC40O60508 579 aaKnown RBP eCLIP7.59□□□□□ -1.19
VIM-202ENST00000421459 GALR3O60755 368 aaPredicted RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 BANF1O75531 89 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 FHP07954 510 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 ZNF888P0CJ79 500 aaPredicted RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 MAOAP21397 527 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 NME2P22392 152 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 GABRB3P28472 473 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 MEOX1P50221 254 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 ITGA8P53708 1063 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 CDKN2DP55273 166 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 GPR85P60893 370 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 TTLL9Q3SXZ7 439 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 HSP90AA5PQ58FG0 334 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 CATSPEREQ5SY80 951 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 RBM20Q5T481 1227 aaKnown RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 PAQR3Q6TCH7 311 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 MDGA2Q7Z553 956 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 CD163Q86VB7 1156 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 C17orf64Q86WR6 236 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 GHDCQ8N2G8 530 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 SLC5A8Q8N695 610 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 TMEM178AQ8NBL3 297 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 MFSD9Q8NBP5 474 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 NFAM1Q8NET5 270 aaPredicted RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 CA5BP1Q8WTZ4 195 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 KCNJ9Q92806 393 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 TBC1D20Q96BZ9 403 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 PTCHD1Q96NR3 888 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 OR4K3Q96R72 315 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 LPAR4Q99677 370 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 SPOCK3Q9BQ16 436 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 AARSD1Q9BTE6 412 aaKnown RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 TSGA10Q9BZW7 698 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms