RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 TCFL5Q9UL49 500 aa17.67■□□□□ 0.42
DDR1-233ENST00000421124 A0A0A6YYC8 382 aaPredicted RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 URADA6NGE7 173 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 ANKDD1BA6NHY2 528 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 I3L1I5 382 aaPredicted RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 RECKO95980 971 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 PROCP04070 461 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 SERPINA6P08185 405 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 FBLP22087 321 aaKnown RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 HNF4AP41235 474 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 AVPR1BP47901 424 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 HERVK_113P63132 956 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 SNRPNP63162 240 aaKnown RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 CDC20Q12834 499 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 DSG2Q14126 1118 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 BEND6Q5SZJ8 279 aaPredicted RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 LIPJQ5W064 366 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 GRHL2Q6ISB3 625 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 MED27Q6P2C8 311 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 LRIG3Q6UXM1 1119 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 CREB3L4Q8TEY5 395 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 UBE2E3Q969T4 207 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 MMABQ96EY8 250 aaPredicted RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 APOPT1Q96IL0 206 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 C1QTNF3Q9BXJ4 246 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 ERVK-6Q9BXR3 956 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 SLC6A16Q9GZN6 736 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 SLC26A1Q9H2B4 701 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 ACTR8Q9H981 624 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 ANKHQ9HCJ1 492 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 ZNF490Q9ULM2 529 aaPredicted RBP17.66■□□□□ 0.42
DDR1-233ENST00000421124 SLC22A7Q9Y694 548 aa17.66■□□□□ 0.42
DDR1-233ENST00000421124 RGS16O15492 202 aaPredicted RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 NKX2-8O15522 239 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 CTIFO43310 598 aaKnown RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 PLIN3O60664 434 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 UGDHO60701 494 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 CLEC3AO75596 197 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 KLF7O75840 302 aaPredicted RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 NSA2O95478 260 aaKnown RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 PRKAR1AP10644 381 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 MYL2P10916 166 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 IL1RNP18510 177 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 HYAL2Q12891 473 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 HERC3Q15034 1050 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 CEP85LQ5SZL2 805 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 ZYG11AQ6WRX3 759 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 PRSS41Q7RTY9 318 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 CROCCP2Q86T23 111 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 MYLK4Q86YV6 388 aaPredicted RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 BANPQ8N9N5 519 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 OR9A4Q8NGU2 314 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 RDH11Q8TC12 318 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 ZNF483Q8TF39 744 aaPredicted RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 CCT6BQ92526 530 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 ATP6V1E2Q96A05 226 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 CCDC126Q96EE4 140 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 NSUN5Q96P11 429 aaKnown RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 IQCGQ9H095 443 aaKnown RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 RHBGQ9H310 441 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 NOL11Q9H8H0 719 aaKnown RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 WDR54Q9H977 334 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 SENP1Q9P0U3 644 aa17.65■□□□□ 0.42
DDR1-233ENST00000421124 PTRH2Q9Y3E5 179 aaKnown RBP17.65■□□□□ 0.42
DDR1-233ENST00000421124 LAMA5O15230 3695 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 G3V2L1 256 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 H0YIG0 161 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 OR7A17O14581 309 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 CNOT3O75175 753 aaKnown RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 ZNF888P0CJ79 500 aaPredicted RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 IMPDH1P20839 514 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 ARL1P40616 181 aaPredicted RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 FOLR3P41439 243 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 CCNG1P51959 295 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 PRKAA2P54646 552 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 STXBP1P61764 594 aaKnown RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 ERV3-1Q14264 604 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 NKG7Q16617 165 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 TOR1AIP1Q5JTV8 583 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 ZNF678Q5SXM1 525 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 RPS27LQ71UM5 84 aaKnown RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 ABHD13Q7L211 337 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 VN1R5Q7Z5H4 357 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 LAS2Q8IYD9 372 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 AFAP1L2Q8N4X5 818 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 AMER3Q8N944 861 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 L3MBTL4Q8NA19 623 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 CCDC63Q8NA47 563 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 OR2Y1Q8NGV0 311 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 PPP4R1Q8TF05 950 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 TMEM237Q96Q45 408 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 SMC6Q96SB8 1091 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 NTMT1Q9BV86 223 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 C12orf65Q9H3J6 166 aaKnown RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 ZBTB26Q9HCK0 441 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 SEMA4BQ9NPR2 832 aaPredicted RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 CTSFQ9UBX1 484 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 ZNF282Q9UDV7 671 aaPredicted RBP17.64■□□□□ 0.41
DDR1-233ENST00000421124 MID2Q9UJV3 735 aa17.64■□□□□ 0.41
DDR1-233ENST00000421124 LHX6Q9UPM6 363 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms