RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 DSG2Q14126 1118 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 FRG1Q14331 258 aaKnown RBP12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 PRTGQ2VWP7 1150 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 RBM20Q5T481 1227 aaKnown RBP12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 ABHD17BQ5VST6 288 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 SPNS3Q6ZMD2 512 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 CAPN12Q6ZSI9 719 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 CEP97Q8IW35 865 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 ADAMTS18Q8TE60 1221 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 ATL1Q8WXF7 558 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 MAGED4Q96JG8 741 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 PRAP1Q96NZ9 151 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 ZNF700Q9H0M5 742 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 SYNPO2LQ9H987 977 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 TMEM184CQ9NVA4 438 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 ARL15Q9NXU5 204 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 PDE10AQ9Y233 779 aa12.51□□□□□ -0.41
CTHRC1-202ENST00000415886 PKDREJQ9NTG1 2253 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 POLQO75417 2590 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 LOC102723996A0A087X1L8 192 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 FAM227AF5H4B4 570 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 H0YGG7 62 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 EIF3HO15372 352 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 PRPF4O43172 522 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 RAD51CO43502 376 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 DIAPH2O60879 1101 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 EZRP15311 586 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 CCND1P24385 295 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 IMPA1P29218 277 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 GRK3P35626 688 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 PLTPP55058 493 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 ARF3P61204 181 aaPredicted RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 NAE1Q13564 534 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 NDUFA9Q16795 377 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 SYT16Q17RD7 645 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 KRTAP21-3Q3LHN1 58 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 ZNF766Q5HY98 468 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 CAPN13Q6MZZ7 669 aaPredicted RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 AGTRAPQ6RW13 159 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 C3orf62Q6ZUJ4 267 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 SLC26A11Q86WA9 606 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 C17orf64Q86WR6 236 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 CSNK1A1LQ8N752 337 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 AMER3Q8N944 861 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 MMABQ96EY8 250 aaPredicted RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 ATG10Q9H0Y0 220 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 TSPAN10Q9H1Z9 355 aaPredicted RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 C14orf105Q9NVL8 296 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 STMN3Q9NZ72 180 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 MOCS1Q9NZB8 636 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 SLC17A6Q9P2U8 582 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 ADAMTS6Q9UKP5 1117 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 RUVBL1Q9Y265 456 aaKnown RBP12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 CELSR1Q9NYQ6 3014 aa12.5□□□□□ -0.41
CTHRC1-202ENST00000415886 MED13LQ71F56 2210 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 E7ESA3 106 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 FANCGO15287 622 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 ZNHIT1O43257 154 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 URI1O94763 535 aaPredicted RBP12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 GUCA1CO95843 209 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 ANXA5P08758 320 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 CAPN3P20807 821 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 SLC26A3P40879 764 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 ST13P50502 369 aaKnown RBP12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 RELAQ04206 551 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 TLE4Q04727 773 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 FASTKD3Q14CZ7 662 aaKnown RBP12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 HKDC1Q2TB90 917 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 DUPD1Q68J44 220 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 FCRLBQ6BAA4 426 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 PAQR7Q86WK9 346 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 ZC3H7AQ8IWR0 971 aaKnown RBP12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 TBC1D19Q8N5T2 526 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 CHTF18Q8WVB6 975 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 IMMP1LQ96LU5 166 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 GPR137Q96N19 417 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 HAUS8Q9BT25 410 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 MKKSQ9NPJ1 570 aaPredicted RBP12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 MKL2Q9ULH7 1088 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 MEMO1Q9Y316 297 aa12.49□□□□□ -0.41
CTHRC1-202ENST00000415886 IGHV3-20A0A0C4DH32 117 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 FAM95CA0A1B0GW59 222 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 A8MUI8 341 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 MYBL2P10244 700 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 ICAM2P13598 275 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 SSTR1P30872 391 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 AVPR1BP47901 424 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 EMP3P54852 163 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 AP1S2P56377 157 aa12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 RPS15AP62244 130 aaKnown RBP12.48□□□□□ -0.41
CTHRC1-202ENST00000415886 TBPL1P62380 186 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms