RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DENND6BQ8NEG7 585 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 FIBINQ8TAL6 211 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 TP53INP1Q96A56 240 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 COQ8BQ96D53 544 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 TXNDC15Q96J42 360 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 KCNC2Q96PR1 638 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 MCCC1Q96RQ3 725 aaPredicted RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 P2RY13Q9BPV8 354 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CPEB1Q9BZB8 566 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 OR51E2Q9H255 320 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CCDC59Q9P031 241 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 SPASTQ9UBP0 616 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 YIPF1Q9Y548 306 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 KIAA1671Q9BY89 1806 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 SCAMP2O15127 329 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 YY2O15391 372 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 RPLP0P05388 317 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 NUDT7P0C024 238 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 GKP32189 559 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 PCYT1AP49585 367 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CRYBA2P53672 197 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 OLR1P78380 273 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 ACSM2AQ08AH3 577 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 GPNMBQ14956 572 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 MPPE1Q53F39 396 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 DGKKQ5KSL6 1271 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CPTPQ5TA50 214 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 ACSM2BQ68CK6 577 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 GPR153Q6NV75 609 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 PNCKQ6P2M8 343 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 VASH1Q7L8A9 365 aaPredicted RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 SLC46A3Q7Z3Q1 461 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 DNAJB7Q7Z6W7 309 aaPredicted RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 TMEM150AQ86TG1 271 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 FAM124AQ86V42 546 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CCDC103Q8IW40 242 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 DNAJC22Q8N4W6 341 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 PARP16Q8N5Y8 322 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CHAC2Q8WUX2 184 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 ATL1Q8WXF7 558 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 TPD52L3Q96J77 140 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 Q96MT0 163 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 CENPOQ9BU64 300 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 RUBCNLQ9H714 662 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 ZNF282Q9UDV7 671 aaPredicted RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 LSM7Q9UK45 103 aaKnown RBP9.44□□□□□ -0.9
CD44-206ENST00000415148 POFUT2Q9Y2G5 429 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 ANAPC1Q9H1A4 1944 aa9.44□□□□□ -0.9
CD44-206ENST00000415148 LOC100506127A0A0U1RQW1 187 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 GABRR3A8MPY1 467 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 A8MV72 311 aaPredicted RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 A8MX80 341 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 FAM47E-STBD1D6RA91 191 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 TNFRSF11BO00300 401 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 PLK4O00444 970 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 AP2A2O94973 939 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 LAMP1P11279 417 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 TNFRSF1BP20333 461 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 RRM2P31350 389 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 TIGD6Q17RP2 521 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 GRHL2Q6ISB3 625 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 KIAA1841Q6NSI8 718 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 TSEN54Q7Z6J9 526 aaKnown RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 HEATR4Q86WZ0 1026 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 CLECL1Q8IZS7 167 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 C11orf65Q8NCR3 313 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 KBTBD8Q8NFY9 601 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 SKA2Q8WVK7 121 aaPredicted RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 ASZ1Q8WWH4 475 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 GGHQ92820 318 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 CLP1Q92989 425 aaKnown RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 VOPP1Q96AW1 172 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 ZNF486Q96H40 463 aaPredicted RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 COL21A1Q96P44 957 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 SDHCQ99643 169 aaPredicted RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 EMILIN2Q9BXX0 1053 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 EBPLQ9BY08 206 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 RRAGCQ9HB90 399 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 FBXL12Q9NXK8 326 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 KLK4Q9Y5K2 254 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 LYVE1Q9Y5Y7 322 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 RNASET2O00584 256 aaKnown RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 SLCO2B1O94956 709 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 SNX4O95219 450 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 PTTG1O95997 202 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 ITGA2P17301 1181 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 ITPKAP23677 461 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 SPINT3P49223 89 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 LIMK1P53667 647 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 CASP9P55211 416 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 RACK1P63244 317 aaKnown RBP9.43□□□□□ -0.9
CD44-206ENST00000415148 CYP4F2P78329 520 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 RBBP4Q09028 425 aa9.43□□□□□ -0.9
CD44-206ENST00000415148 LMAN2Q12907 356 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms