RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	RHBDD2	Q6NTF9	364 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	LETMD1	Q6P1Q0	360 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	ZCCHC23	Q6ZST2	131 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	SYVN1	Q86TM6	617 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	TRIM42	Q8IWZ5	723 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	HOMEZ	Q8IX15	550 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	OR7G3	Q8NG95	312 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	NT5C	Q8TCD5	201 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	AGAP11	Q8TF27	550 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	LRFN5	Q96NI6	719 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	SLC29A3	Q9BZD2	475 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	ELOVL6	Q9H5J4	265 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	DKK4	Q9UBT3	224 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	NDOR1	Q9UHB4	597 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	ZNF490	Q9ULM2	529 aa	Predicted RBP	12.54	□□□□□ -0.4
SF1-206	ENST00000413725	SNX6	Q9UNH7	406 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	TSC22D4	Q9Y3Q8	395 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725	IGF2R	P11717	2491 aa		12.54	□□□□□ -0.4
SF1-206	ENST00000413725		A0A1B0GX78	115 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	TMEM114	B3SHH9	223 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	12.53	□□□□□ -0.4
SF1-206	ENST00000413725	FFAR3	O14843	346 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	DSCR3	O14972	297 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	GPR42	O15529	346 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	KRT6A	P02538	564 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	KRT6B	P04259	564 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	SERPINE1	P05121	402 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	CCNYL3	P0C7X3	344 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	LIPC	P11150	499 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	NR1D1	P20393	614 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	AGXT	P21549	392 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	ALAS2	P22557	587 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	GRK2	P25098	689 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	HMOX2	P30519	316 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	PIK3CB	P42338	1070 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	KRT6C	P48668	564 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	SKP1	P63208	163 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	FAM53B	Q14153	422 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	TOR1AIP1	Q5JTV8	583 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	FRG2	Q64ET8	278 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.53	□□□□□ -0.4
SF1-206	ENST00000413725	TTLL10	Q6ZVT0	673 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	ABHD13	Q7L211	337 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	ZFAND4	Q86XD8	727 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	NLGN4X	Q8N0W4	816 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	ESX1	Q8N693	406 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	CDYL2	Q8N8U2	506 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	GALNT6	Q8NCL4	622 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	12.53	□□□□□ -0.4
SF1-206	ENST00000413725	HUS1B	Q8NHY5	278 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	MDM1	Q8TC05	714 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	CREB3L4	Q8TEY5	395 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	FGF11	Q92914	225 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	RNF31	Q96EP0	1072 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	MVB12A	Q96EY5	273 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	C10orf90	Q96M02	699 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	FRG2B	Q96QU4	278 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	DPH2	Q9BQC3	489 aa	Predicted RBP	12.53	□□□□□ -0.4
SF1-206	ENST00000413725	DHCR7	Q9UBM7	475 aa	Known RBP	12.53	□□□□□ -0.4
SF1-206	ENST00000413725	CDC14A	Q9UNH5	594 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	WDFY3	Q8IZQ1	3526 aa		12.53	□□□□□ -0.4
SF1-206	ENST00000413725	MEN1	O00255	615 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	RAD1	O60671	282 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	SNUPN	O95149	360 aa	Known RBP	12.52	□□□□□ -0.41
SF1-206	ENST00000413725	CAPN1	P07384	714 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	PIM1	P11309	404 aa	Predicted RBP	12.52	□□□□□ -0.41
SF1-206	ENST00000413725	BGN	P21810	368 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	CCR10	P46092	362 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	GCGR	P47871	477 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	ATP1A2	P50993	1020 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	TGM3	Q08188	693 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	ABHD18	Q0P651	414 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	GALNT1	Q10472	559 aa	Predicted RBP	12.52	□□□□□ -0.41
SF1-206	ENST00000413725	HERC3	Q15034	1050 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	TMEM214	Q6NUQ4	689 aa	Known RBP	12.52	□□□□□ -0.41
SF1-206	ENST00000413725	NIPAL1	Q6NVV3	410 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	PRMT9	Q6P2P2	845 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	UNQ6494/PRO21346	Q6UXR6	183 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	VN1R5	Q7Z5H4	357 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	CUZD1	Q86UP6	607 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	DSEL	Q8IZU8	1212 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	KCT2	Q8NC54	265 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	ZCCHC10	Q8TBK6	192 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	RAB3IL1	Q8TBN0	382 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	WDR20	Q8TBZ3	569 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	METTL6	Q8TCB7	284 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF473	Q8WTR7	871 aa	Known RBP	12.52	□□□□□ -0.41
SF1-206	ENST00000413725	GAL3ST3	Q96A11	431 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	CMTM7	Q96FZ5	175 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	MTERF1	Q99551	399 aa	Known RBP	12.52	□□□□□ -0.41
SF1-206	ENST00000413725	MACROD1	Q9BQ69	325 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	CENPK	Q9BS16	269 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	SPRY4	Q9C004	299 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	SLC6A16	Q9GZN6	736 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	ANKH	Q9HCJ1	492 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	DMRT3	Q9NQL9	472 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	ZNF225	Q9UK10	706 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	PADI1	Q9ULC6	663 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725	SLC22A7	Q9Y694	548 aa		12.52	□□□□□ -0.41
SF1-206	ENST00000413725		A0A088AWK7	358 aa		12.51	□□□□□ -0.41

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