RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 MINDY4Q4G0A6 757 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 DEFB134Q4QY38 66 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 AGAP7PQ5VUJ5 663 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 IRAK1BP1Q5VVH5 260 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 TMEM205Q6UW68 189 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 SLCO4C1Q6ZQN7 724 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 LANCL3Q6ZV70 420 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 KLHDC8AQ8IYD2 350 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 ZADH2Q8N4Q0 377 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 AFAP1L2Q8N4X5 818 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 NT5CQ8TCD5 201 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 C19orf60Q96EN9 201 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 AGAP4Q96P64 663 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 AIF1LQ9BQI0 150 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 B3GNT3Q9Y2A9 372 aa24.87■■□□□ 1.57
VEGFA-207ENST00000413642 KLHL41O60662 606 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 ATP6V0D1P61421 351 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 BMPR2Q13873 1038 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 LINC00696Q6ZRV3 163 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 TBC1D19Q8N5T2 526 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 EFCAB3Q8N7B9 438 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 PSMF1Q92530 271 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 EXT2Q93063 718 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 PEX11GQ96HA9 241 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 AICDAQ9GZX7 198 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 KLHL31Q9H511 634 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 WWOXQ9NZC7 414 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 NINJ2Q9NZG7 142 aa24.86■■□□□ 1.57
VEGFA-207ENST00000413642 A0A1W2PQ72 361 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 GALR3O60755 368 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-207ENST00000413642 PRAMEF4O60810 478 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 SLC35E2BP0CK96 405 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 C8orf89P0DMQ9 161 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 C1GALT1C1LP0DN25 315 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 ALOX12P18054 663 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 GNLYP22749 145 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 AHRP35869 848 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 HSPA7P48741 367 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 RAB8AP61006 207 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 HYAL2Q12891 473 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 PRAMEF9Q5VWM5 478 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 Q6ZS92 163 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 RAPH1Q70E73 1250 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 CUZD1Q86UP6 607 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 ATCAYQ86WG3 371 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 KBTBD2Q8IY47 623 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 CISD2Q8N5K1 135 aaKnown RBP24.85■■□□□ 1.57
VEGFA-207ENST00000413642 UTP15Q8TED0 518 aaKnown RBP24.85■■□□□ 1.57
VEGFA-207ENST00000413642 TM9SF4Q92544 642 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 KIAA1191Q96A73 305 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 CYTH2Q99418 400 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 ZNF700Q9H0M5 742 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 CD274Q9NZQ7 290 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 MAP10Q9P2G4 905 aa24.85■■□□□ 1.57
VEGFA-207ENST00000413642 MYO18BQ8IUG5 2567 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 HMX2A2RU54 273 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 C4orf51C9J302 202 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 CDC123O75794 336 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-207ENST00000413642 PRR35P0CG20 571 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 SRSF1Q07955 248 aaKnown RBP eCLIP24.84■■□□□ 1.571e-7■■■□□ 14.7
VEGFA-207ENST00000413642 RGS1Q08116 209 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 HERC3Q15034 1050 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 IGFL2Q6UWQ7 119 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 BRIX1Q8TDN6 353 aaKnown RBP24.84■■□□□ 1.57
VEGFA-207ENST00000413642 CREB3L4Q8TEY5 395 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 ILKAPQ9H0C8 392 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-207ENST00000413642 ALG9Q9H6U8 611 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 IGSF5Q9NSI5 407 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 PTGFRNQ9P2B2 879 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 ASB1Q9Y576 335 aa24.84■■□□□ 1.57
VEGFA-207ENST00000413642 CHST10O43529 356 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 SERPINA7P05543 415 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 GNAZP19086 355 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 TFEBP19484 476 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 GGT5P36269 586 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 CDC16Q13042 620 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 NAB1Q13506 487 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 SLBPQ14493 270 aaKnown RBP eCLIP24.83■■□□□ 1.57
VEGFA-207ENST00000413642 TOR1AIP1Q5JTV8 583 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 ISCA2Q86U28 154 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 SIRT6Q8N6T7 355 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 METTL21AQ8WXB1 218 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 IFT81Q8WYA0 676 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 SNRNP40Q96DI7 357 aaKnown RBP24.83■■□□□ 1.57
VEGFA-207ENST00000413642 IMMP1LQ96LU5 166 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 WDR77Q9BQA1 342 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-207ENST00000413642 SLC6A16Q9GZN6 736 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 LANCL2Q9NS86 450 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 DNAJC11Q9NVH1 559 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 RIC8BQ9NVN3 520 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 RNF112Q9ULX5 631 aa24.83■■□□□ 1.57
VEGFA-207ENST00000413642 VPS4BO75351 444 aa24.82■■□□□ 1.56
VEGFA-207ENST00000413642 H2AFYO75367 372 aaKnown RBP24.82■■□□□ 1.56
VEGFA-207ENST00000413642 SEC24DO94855 1032 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-207ENST00000413642 IRF9Q00978 393 aa24.82■■□□□ 1.56
VEGFA-207ENST00000413642 UAP1Q16222 522 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-207ENST00000413642 MROH9Q5TGP6 573 aa24.82■■□□□ 1.56
VEGFA-207ENST00000413642 B3GNTL1Q67FW5 361 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-207ENST00000413642 SULT1C3Q6IMI6 304 aa24.82■■□□□ 1.56
VEGFA-207ENST00000413642 ISLR2Q6UXK2 745 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms