RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 EXT1Q16394 746 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 PDK4Q16654 411 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 ADPRMQ3LIE5 342 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 CRB2Q5IJ48 1285 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 B3GNTL1Q67FW5 361 aaPredicted RBP6.06□□□□□ -1.44
USP54-202ENST00000413442 ADGRD1Q6QNK2 874 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 KIRREL2Q6UWL6 708 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 TIFABQ6ZNK6 161 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 SLCO4C1Q6ZQN7 724 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 MICALCLQ6ZW33 695 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 VN1R4Q7Z5H5 301 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 PPP1R32Q7Z5V6 425 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 ATCAYQ86WG3 371 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 FAM20CQ8IXL6 584 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 KBTBD2Q8IY47 623 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 LGI4Q8N135 537 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 AMER3Q8N944 861 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 OR11G2Q8NGC1 345 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 M1APQ8TC57 530 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 PPP4R1Q8TF05 950 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 IFT81Q8WYA0 676 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 HAS2Q92819 552 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 PNPLA2Q96AD5 504 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 CCDC126Q96EE4 140 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 PKNOX2Q96KN3 472 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 C10orf90Q96M02 699 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 OR4K3Q96R72 315 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 ATOH8Q96SQ7 321 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 CENPKQ9BS16 269 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 TBCDQ9BTW9 1192 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 SLC6A16Q9GZN6 736 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 ZNF700Q9H0M5 742 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 L2HGDHQ9H9P8 463 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 PRDM9Q9NQV7 894 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 ABCF3Q9NUQ8 709 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 CUEDC1Q9NWM3 386 aaPredicted RBP6.06□□□□□ -1.44
USP54-202ENST00000413442 OPTCQ9UBM4 332 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 CIDEBQ9UHD4 219 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 DCDC2Q9UHG0 476 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 C3orf18Q9UK00 162 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 STK38LQ9Y2H1 464 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 MMACHCQ9Y4U1 282 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 HS3ST3B1Q9Y662 390 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 SPACA6W5XKT8 324 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 FER1L5A0AVI2 2057 aa6.06□□□□□ -1.44
USP54-202ENST00000413442 CACNA1GO43497 2377 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 A0A096LPK6 155 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 A0A0A6YYC8 382 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 IQANK1A0A1B0GTG1 560 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 STX16-NPEPL1H3BU86 382 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 I3L1I5 382 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 PSMD12O00232 456 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 SOCS6O14544 535 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 STX16O14662 325 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 NDUFS4O43181 175 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 SLC28A2O43868 658 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 ALOX12BO75342 701 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 FAM155BO75949 473 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 C8orf89P0DMQ9 161 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 RNH1P13489 461 aaKnown RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 PLA2G2AP14555 144 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 TFEBP19484 476 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 PTX3P26022 381 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 TNFRSF8P28908 595 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 MAGEA12P43365 314 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 KCNC1P48547 511 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 CD97P48960 835 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 IRF8Q02556 426 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 ATP1A4Q13733 1029 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 NAA30Q147X3 362 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 RBBP5Q15291 538 aaKnown RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 TERF2Q15554 542 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 INAQ16352 499 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 ZXDCQ2QGD7 858 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 HKDC1Q2TB90 917 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 VWA2Q5GFL6 755 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 CATSPEREQ5SY80 951 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 PLAG1Q6DJT9 500 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 H3F3CQ6NXT2 135 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 MED27Q6P2C8 311 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 TRIM40Q6P9F5 258 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 ISLR2Q6UXK2 745 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 QSOX2Q6ZRP7 698 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 COX15Q7KZN9 410 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 CPEB2Q7Z5Q1 589 aaKnown RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 ZNF595Q8IYB9 648 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 LAS2Q8IYD9 372 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 C17orf53Q8N3J3 647 aaPredicted RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 HORMAD2Q8N7B1 307 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 GALNT11Q8NCW6 608 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 FDCSPQ8NFU4 85 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 OR2L5Q8NG80 312 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 OR51Q1Q8NH59 317 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 CREB3L4Q8TEY5 395 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 UBTD2Q8WUN7 234 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 GAL3ST3Q96A11 431 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 ALKBH8Q96BT7 664 aaKnown RBP6.05□□□□□ -1.44
USP54-202ENST00000413442 TBC1D20Q96BZ9 403 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 PYCR2Q96C36 320 aa6.05□□□□□ -1.44
USP54-202ENST00000413442 CMTM7Q96FZ5 175 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms