RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 PQLC1Q8N2U9 271 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 MFSD2AQ8NA29 543 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 DNAJB14Q8TBM8 379 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 FRS2Q8WU20 508 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 EXOSC8Q96B26 276 aaKnown RBP8.23□□□□□ -1.09
SYNE1-211ENST00000413186 PRAP1Q96NZ9 151 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 PHB2Q99623 299 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 OSBPL11Q9BXB4 747 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 C1QTNF2Q9BXJ5 285 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 CADM1Q9BY67 442 aaKnown RBP8.23□□□□□ -1.09
SYNE1-211ENST00000413186 POT1Q9NUX5 634 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 STOX2Q9P2F5 926 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-211ENST00000413186 MYRFQ9Y2G1 1151 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 RNF11Q9Y3C5 154 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 V9GYQ6 96 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 PSMA3P25788 255 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 MRPS22P82650 360 aaKnown RBP8.23□□□□□ -1.09
SYNE1-211ENST00000413186 VAC14Q08AM6 782 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 GCNT7Q6ZNI0 430 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 GPR141Q7Z602 305 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 CCDC36Q8IYA8 594 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 ADAMTS15Q8TE58 950 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 ANKRD49Q8WVL7 239 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 BTBD9Q96Q07 612 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF607Q96SK3 696 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 BEX2Q9BXY8 128 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 SPRTNQ9H040 489 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-211ENST00000413186 EPB41L1Q9H4G0 881 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 TRIM36Q9NQ86 728 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 ING3Q9NXR8 418 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 ZDHHC2Q9UIJ5 367 aa8.23□□□□□ -1.09
SYNE1-211ENST00000413186 NUMA1Q14980 2115 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 EPOPA6NHQ4 379 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PLRG1O43660 514 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TOP3BO95985 862 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 DCNP07585 359 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 NT5EP21589 574 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 GSTM2P28161 218 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 AGTR2P50052 363 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 HMGCS1Q01581 520 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 EMX2Q04743 252 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 RALGDSQ12967 914 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ATAD3CQ5T2N8 411 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TTC23Q5W5X9 447 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 NXPE4Q6UWF7 544 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 DHRSXQ8N5I4 330 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 C1orf52Q8N6N3 182 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ASB12Q8WXK4 309 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 CLIP3Q96DZ5 547 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 RMND5BQ96G75 393 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 UHRF1Q96T88 793 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 MCMBPQ9BTE3 642 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 DPH7Q9BTV6 452 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TBCDQ9BTW9 1192 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 EPB41L4BQ9H329 900 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PIF1Q9H611 641 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 DENND2DQ9H6A0 471 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 AKTIPQ9H8T0 292 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PELI2Q9HAT8 420 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 LYARQ9NX58 379 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 MS4A12Q9NXJ0 267 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 SARDHQ9UL12 918 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 A0A087WXM4 84 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 SMIM31A0A1B0GVY4 71 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 SNTNA6NMZ2 147 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TLR4O00206 839 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PDPK1O15530 556 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TPST1O60507 370 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 SLC16A8O95907 504 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 CSNK2A2P19784 350 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ACSL1P33121 698 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TOP3AQ13472 1001 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 RFX4Q33E94 735 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TMEM35AQ53FP2 167 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TOR1AIP1Q5JTV8 583 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ADGRG6Q86SQ4 1221 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ZDHHC13Q8IUH4 622 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 NAT14Q8WUY8 206 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PYDC1Q8WXC3 89 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PLEKHA8Q96JA3 519 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ART5Q96L15 291 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF285Q96NJ3 590 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 TMEM79Q9BSE2 394 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 DUSP26Q9BV47 211 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 PITHD1Q9GZP4 211 aaPredicted RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 MKRN2Q9H000 416 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 H3BNH8 94 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 RSL1D1O76021 490 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 MTHFD1P11586 935 aaKnown RBP8.22□□□□□ -1.09
SYNE1-211ENST00000413186 JAK1P23458 1154 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 MPIP34949 423 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ASPGQ86U10 573 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 RASGRP3Q8IV61 690 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 SLC22A15Q8IZD6 547 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 CDK20Q8IZL9 346 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ZNF786Q8N393 782 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
SYNE1-211ENST00000413186 RHBDF1Q96CC6 855 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms