RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 AIM2O14862 343 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ANGPT2O15123 496 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 PRMT3O60678 531 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 CTSVO60911 334 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 EEDO75530 441 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 STATHP02808 62 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SERPIND1P05546 499 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ANXA4P09525 319 aaPredicted RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 PVRP15151 417 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 NQO1P15559 274 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 ST6GAL1P15907 406 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 GLB1P16278 677 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 RAP1GDS1P52306 607 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 CLNS1AP54105 237 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 GFERP55789 205 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 CLDN8P56748 225 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 C21orf58P58505 322 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SLC25A3Q00325 362 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 RELAQ04206 551 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ZNF763Q0D2J5 394 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 HYAL2Q12891 473 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 STX5Q13190 355 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ZIC1Q15915 447 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 VPS26BQ4G0F5 336 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 TMEM35AQ53FP2 167 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 DEPDC1Q5TB30 811 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 IRGCQ6NXR0 463 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ZC3H14Q6PJT7 736 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 FIGLAQ6QHK4 219 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 VN1R4Q7Z5H5 301 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 UBE3DQ7Z6J8 389 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ASPGQ86U10 573 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 RETREG3Q86VR2 466 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 NUDT13Q86X67 352 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 RIMKLAQ8IXN7 391 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 KRTCAP2Q8N6L1 136 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 GLB1L3Q8NCI6 653 aaPredicted RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 TRPV3Q8NET8 790 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 OR2I1PQ8NGU4 316 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 WDR48Q8TAF3 677 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 NT5CQ8TCD5 201 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SLC13A3Q8WWT9 602 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 UTP4Q969X6 686 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 ZUFSPQ96AP4 578 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 VPS33AQ96AX1 596 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 TESCQ96BS2 214 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 THAP11Q96EK4 314 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 LOXL4Q96JB6 756 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 EGLN2Q96KS0 407 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 TMEM74Q96NL1 305 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 FCRL4Q96PJ5 515 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 OR2A5Q96R48 311 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 F2RL3Q96RI0 385 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ZBTB18Q99592 522 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 CENPKQ9BS16 269 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SORBS1Q9BX66 1292 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 CADM1Q9BY67 442 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 DPY30Q9C005 99 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SLC6A16Q9GZN6 736 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 REXO4Q9GZR2 422 aaKnown RBP6.35□□□□□ -1.39
VPS41-204ENST00000413141 AICDAQ9GZX7 198 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 RAB33BQ9H082 229 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 KLHL25Q9H0H3 589 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 ABCG4Q9H172 646 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SEMA6CQ9H3T2 930 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 SMOC1Q9H4F8 434 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 LHX9Q9NQ69 397 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 NDE1Q9NXR1 346 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 BAIAP2L1Q9UHR4 511 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 MCM8Q9UJA3 840 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 PCDHGA5Q9Y5G8 931 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 R4GN57 208 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 U3KQA8 63 aa6.35□□□□□ -1.39
VPS41-204ENST00000413141 GON4LQ3T8J9 2241 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 MN1Q10571 1320 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 HEATR5BQ9P2D3 2071 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 IGHV1OR21-1A0A087WYE8 117 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 A0A0A6YYD5 115 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 A0A0J9YVX5 310 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 GNG14A0A1W2PPG7 69 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 LRIT2A6NDA9 550 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 TLCD2A6NGC4 264 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 FXYD1O00168 92 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 RTCAO00442 366 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 SCAMP2O15127 329 aaKnown RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 CAPN5O15484 640 aaPredicted RBP6.34□□□□□ -1.39
VPS41-204ENST00000413141 GSC2O15499 205 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 CFLARO15519 480 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 P2RX6O15547 441 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 SIGLEC6O43699 453 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 DUX1O43812 170 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PCDHGA12O60330 932 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 PRAMEF10O60809 474 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 KLHL18O94889 574 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 LRATO95237 230 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 GBAP04062 536 aa6.34□□□□□ -1.39
VPS41-204ENST00000413141 IL6P05231 212 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms