RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 VDRP11473 427 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CDH3P22223 829 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 EPHA2P29317 976 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 HOXC8P31273 242 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CSTF2P33240 577 aaKnown RBP eCLIP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RPL21P46778 160 aaKnown RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TPD52P55327 224 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SNU13P55769 128 aaKnown RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 STX1BP61266 288 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RPL24P83731 157 aaKnown RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ARF5P84085 180 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 YWHAHQ04917 246 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MBTD1Q05BQ5 628 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SULT2A1Q06520 285 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MZT1Q08AG7 82 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SGCGQ13326 291 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GRB14Q14449 540 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PTPN14Q15678 1187 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C2orf76Q3KRA6 126 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ALDH1L2Q3SY69 923 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MCMDC2Q4G0Z9 681 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF789Q5FWF6 425 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GRTP1Q5TC63 336 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C20orf194Q5TEA3 1177 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 LCN1P1Q5VSP4 162 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TATDN1Q6P1N9 297 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NOTUMQ6P988 496 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PLXDC2Q6UX71 529 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF852Q6ZMS4 543 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MACC1Q6ZN28 852 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CLEC17AQ6ZS10 378 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RAPH1Q70E73 1250 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 G2E3Q7L622 706 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPATA19Q7Z5L4 167 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 GPR142Q7Z601 462 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ISCA2Q86U28 154 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF444Q8N0Y2 327 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 NUP93Q8N1F7 819 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SIX6OS1Q8N1H7 587 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CERS5Q8N5B7 392 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ZNF441Q8N8Z8 693 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 OR1J1Q8NGS3 322 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SPATA22Q8NHS9 363 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SUSD6Q92537 303 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 DNASE1L2Q92874 299 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 BADQ92934 168 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TSACCQ96A04 125 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ST6GAL2Q96JF0 529 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C12orf42Q96LP6 360 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C16orf70Q9BSU1 422 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 THUMPD2Q9BTF0 503 aaKnown RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TRAF4Q9BUZ4 470 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RSPH9Q9H1X1 276 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TFB2MQ9H5Q4 396 aaKnown RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SLA2Q9H6Q3 261 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 RNF121Q9H920 327 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 ACKR4Q9NPB9 350 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TAAR2Q9P1P5 351 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 C5AR2Q9P296 337 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 CACNG4Q9UBN1 327 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 TCF19Q9Y242 345 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 SIPA1L3O60292 1781 aaPredicted RBP2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 MROH7-TTC4A0A0A0MT08 1334 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 FLT1P17948 1338 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 IL16Q14005 1332 aa2.41□□□□□ -2.02
RNU6-1140P-201ENST00000410517 PKD1L2Q7Z442 2459 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 A0A0U1RQG5 324 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C13orf42A0A1B0GVH6 325 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IQCMA0A1B0GVH7 501 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C2orf81A6NN90 581 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HEPACAM2A8MVW5 462 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF587BE7ETH6 402 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF197O14709 1029 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC30A4O14863 429 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KLF11O14901 512 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 AP5Z1O43299 807 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC28A2O43868 658 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 XPNPEP2O43895 674 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KRT33AO76009 404 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GBAP04062 536 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C8orf89P0DMQ9 161 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGHV4-38-2P0DP08 117 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CYBAP13498 195 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HLA-DOBP13765 273 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LIFP15018 202 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PAX1P15863 534 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CYP2B6P20813 491 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EFNA1P20827 205 aaPredicted RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ITGA3P26006 1051 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR3A3P47888 321 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NPBWR1P48145 328 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FUT6P51993 359 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF132P52740 706 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MFAP3P55082 362 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CDH11P55287 796 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAZP56270 477 aaKnown RBP2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MYL7Q01449 175 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CACNG1Q06432 222 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SPP2Q13103 211 aa2.4□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SMU1Q2TAY7 513 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms