RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ZNF572Q7Z3I7 529 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 ASB15Q8WXK1 588 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 CD180Q99467 661 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 PLEKHA3Q9HB20 300 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 CXCR6O00574 342 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 TGFB1I1O43294 461 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 DMWDQ09019 674 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 SNX29P2Q8IUI4 249 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 NFKBIDQ8NI38 313 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 DQX1Q8TE96 717 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 UBXN10Q96LJ8 280 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 ZCCHC3Q9NUD5 404 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 HAO2Q9NYQ3 351 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 PPM1HQ9ULR3 514 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 MROH1Q8NDA8 1641 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 TRPM6Q9BX84 2022 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 OR6C74A6NCV1 312 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 ZNF860A6NHJ4 632 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 SASH3O75995 380 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 AGR2O95994 175 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 NR2C1P13056 603 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 RPS21P63220 83 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 NNATQ16517 81 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 UBE2UQ5VVX9 321 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 CD300LFQ8TDQ1 290 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 AASSQ9UDR5 926 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 SORCS3Q9UPU3 1222 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 P04436 131 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 HTR1AP08908 422 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 GLP1RP43220 463 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 GRK1Q15835 563 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 RAB12Q6IQ22 244 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 ZNF808Q8N4W9 903 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 FANK1Q8TC84 345 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 POP5Q969H6 163 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 BARD1Q99728 777 aaKnown RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 TREX2Q9BQ50 279 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 STOX2Q9P2F5 926 aaPredicted RBP10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 ACAD8Q9UKU7 415 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 TLR6Q9Y2C9 796 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 FADS3Q9Y5Q0 445 aa10.9□□□□□ -0.66
PRPF40A-202ENST00000410080 DIDO1Q9BTC0 2240 aaKnown RBP10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 SOWAHBA6NEL2 793 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 PRR5-ARHGAP8B1AHC4 643 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 CILPO75339 1184 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 PTGER3P43115 390 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 ARHGAP8P85298 464 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 SCGB2A2Q13296 93 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 SPIN4Q56A73 249 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 PRELID2Q8N945 189 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 SAT2Q96F10 170 aaPredicted RBP10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 FZD4Q9ULV1 537 aa10.9□□□□□ -0.67
PRPF40A-202ENST00000410080 RBM34P42696 430 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 CHRNA6Q15825 494 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 CMTM8Q8IZV2 173 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 NODALQ96S42 347 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 C3P01024 1663 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 MRPL3P09001 348 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 AOC1P19801 751 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 FRMD7Q6ZUT3 714 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 OR5T1Q8NG75 326 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 FBXW11Q9UKB1 542 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 PRPF19Q9UMS4 504 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 NENFQ9UMX5 172 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 PRORSD1PA6NEY8 169 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 DSTNP60981 165 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 AIMP2Q13155 320 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 TIGD5Q53EQ6 642 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 TAC4Q86UU9 113 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 CNTD1Q8N815 330 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 LSM14AQ8ND56 463 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 THAP6Q8TBB0 222 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 NAA11Q9BSU3 229 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 NUFIP1Q9UHK0 495 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 FZD10Q9ULW2 581 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 RGPD1P0DJD0 1748 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 OR51F1A6NGY5 319 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 CD79AP11912 226 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 JUNDP17535 347 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 CSNK2A2P19784 350 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 GGT2P36268 569 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 POLR2HP52434 150 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 CRTC1Q6UUV9 634 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 USP53Q70EK8 1073 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 SH3RF1Q7Z6J0 888 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 LRRC58Q96CX6 371 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 ATG5Q9H1Y0 275 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 C1orf21Q9H246 121 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 SLCO1B3Q9NPD5 702 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 PRMT8Q9NR22 394 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 RP1P56715 2156 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 TMEM265A0A087WTH1 108 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 A0A0G2JLL6 359 aaPredicted RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 FAM149AA5PLN7 773 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 NARSO43776 548 aaKnown RBP10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 RAD51DO75771 328 aa10.89□□□□□ -0.67
PRPF40A-202ENST00000410080 F7P08709 466 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms