RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 PLXDC1Q8IUK5 500 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ARHGAP12Q8IWW6 846 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CDH26Q8IXH8 852 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF683Q8IZ20 524 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 PYROXD2Q8N2H3 581 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 RIBC1Q8N443 379 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 NATD1Q8N6N6 113 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ARFGAP1Q8N6T3 406 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 PTGR2Q8N8N7 351 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 KDM1BQ8NB78 822 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 TXNDC5Q8NBS9 432 aaKnown RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CAMKVQ8NCB2 501 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 BBOF1Q8ND07 529 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 LRRC8CQ8TDW0 803 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CASKIN2Q8WXE0 1202 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 SYN2Q92777 582 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 REXO5Q96IC2 774 aaKnown RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 BTN2A3PQ96KV6 586 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 KLHL15Q96M94 604 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF641Q96N77 438 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 JMJD8Q96S16 334 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 UBL7Q96S82 380 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 PEBP4Q96S96 227 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 INTS14Q96SY0 518 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CDRT15Q96T59 188 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 NUP85Q9BW27 656 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 TPSD1Q9BZJ3 242 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CIPCQ9C0C6 399 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 TINAGL1Q9GZM7 467 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 MRPL18Q9H0U6 180 aaKnown RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 SLC6A17Q9H1V8 727 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 SYNPO2LQ9H987 977 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 FANCEQ9HB96 536 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CRLF2Q9HC73 371 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ATP13A1Q9HD20 1204 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 LZTFL1Q9NQ48 299 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 PRMT8Q9NR22 394 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 IARS2Q9NSE4 1012 aaKnown RBP4.42□□□□□ -1.7
SF3B1-202ENST00000409915 RLIMQ9NVW2 624 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 SOHLH2Q9NX45 425 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 TAS2R7Q9NYW3 318 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ASIC3Q9UHC3 531 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 MAGEL2Q9UJ55 1249 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 MKLN1Q9UL63 735 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 RIMKLBQ9ULI2 386 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 SNX12Q9UMY4 172 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 TFR2Q9UP52 801 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 ARL2BPQ9Y2Y0 163 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 RAD54BQ9Y620 910 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 R4GN57 208 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 CACNA1IQ9P0X4 2223 aa4.42□□□□□ -1.7
SF3B1-202ENST00000409915 MUC22E2RYF6 1773 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 A0A1B0GVM2 712 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 TCRBV21S2A2A0A5A6 115 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 GRID2IPA4D2P6 1211 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 OR5K3A6NET4 321 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 TCAF2A6NFQ2 919 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 TMEM191CA6NGB0 347 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 CDRT15L2A8MXV6 281 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 E9PAM4 449 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 SLC33A1O00400 549 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ADAMDEC1O15204 470 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF185O15231 689 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 HYAL3O43820 417 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 GPC4O75487 556 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 TRMUO75648 421 aaKnown RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 RASAL1O95294 804 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ESRRBO95718 433 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 PAHP00439 452 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ENO2P09104 434 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 C1SP09871 688 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 SP9P0CG40 484 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 UROSP10746 265 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 SLC2A3P11169 496 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ACP5P13686 325 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 NCF1P14598 390 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 HOXB2P14652 356 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 TCP1P17987 556 aaKnown RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 CDH3P22223 829 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 TACR1P25103 407 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 PKLRP30613 574 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 STX2P32856 288 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 HSD17B2P37059 387 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 CSKP41240 450 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 CXCL12P48061 93 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 STK19P49842 368 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 CCR3P51677 355 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF135P52742 658 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 HK2P52789 917 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 BLVRAP53004 296 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 P2RX3P56373 397 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 KIAA1024LP59773 190 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 SRP54P61011 504 aaKnown RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 NHLH1Q02575 133 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 RELQ04864 619 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-202ENST00000409915 ZNF844Q08AG5 666 aa4.41□□□□□ -1.7
SF3B1-202ENST00000409915 CHIT1Q13231 466 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms