RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 KDM1BQ8NB78 822 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 PTCD3Q96EY7 689 aaKnown RBP10.96□□□□□ -0.65
SNX13-202ENST00000409604 MRGPRX3Q96LB0 322 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ATOH8Q96SQ7 321 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 CCDC28BQ9BUN5 200 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 GSTO2Q9H4Y5 243 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 REEP1Q9H902 201 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 OBP2AQ9NY56 170 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ANKMY1Q9P2S6 941 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 DKK3Q9UBP4 350 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 SCML1Q9UN30 329 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 ERVK-11Q9UQG0 969 aa10.96□□□□□ -0.65
SNX13-202ENST00000409604 C1orf105O95561 183 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 F3P13726 295 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 VHLP40337 213 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 EPHA5P54756 1037 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 RPE65Q16518 533 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 AGBL4Q5VU57 503 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 RNF168Q8IYW5 571 aaPredicted RBP10.96□□□□□ -0.66
SNX13-202ENST00000409604 COX18Q8N8Q8 333 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 ZNF563Q8TA94 476 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 SLC37A2Q8TED4 501 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 ASB11Q8WXH4 323 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 NSMCE3Q96MG7 304 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 DACH2Q96NX9 599 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 DEPDC7Q96QD5 511 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 TEX12Q9BXU0 123 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 FAM86C1Q9NVL1 165 aa10.96□□□□□ -0.66
SNX13-202ENST00000409604 DHCR7Q9UBM7 475 aaKnown RBP10.96□□□□□ -0.66
SNX13-202ENST00000409604 SGK494L7N484 410 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 STX16O14662 325 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 AQP9O43315 295 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 SUV39H1O43463 412 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 PRKRAO75569 313 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 KRT75O95678 551 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 IL7RP16871 459 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 EIF2B5Q13144 721 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 PIP5KL1Q5T9C9 394 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 ANXA8L1Q5VT79 327 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 TMEM26Q6ZUK4 368 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 OR2L2Q8NH16 312 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 PHF10Q8WUB8 498 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 ELOVL7A1L3X0 281 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 LDB3O75112 727 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 KLK3P07288 261 aaPredicted RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 PRPS2P11908 318 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 CSNK2A2P19784 350 aaPredicted RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 CERS1P27544 350 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 MAT1AQ00266 395 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 KCNAB1Q14722 419 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 TMEM164Q5U3C3 297 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 METTL21CQ5VZV1 264 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 DDHD1Q8NEL9 900 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 STARD8Q92502 1023 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 ZNF382Q96SR6 550 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 ACTR10Q9NZ32 417 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 MARK1Q9P0L2 795 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 DLGAP2Q9P1A6 1054 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 RHCGQ9UBD6 479 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 IKZF3Q9UKT9 509 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 C15orf38-AP3S2A0A0A6YYH1 394 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 OR2W5A6NFC9 320 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 SLC16A5O15375 505 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 DUX1O43812 170 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 GTF2E2P29084 291 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 PRLHRP49683 370 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 AFF3P51826 1226 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 SPRED3Q2MJR0 410 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 HENMT1Q5T8I9 393 aaKnown RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 CYS1Q717R9 158 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 ARPINQ7Z6K5 226 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 ASPGQ86U10 573 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 CYP4Z1Q86W10 505 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 FBXW8Q8N3Y1 598 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 GPR150Q8NGU9 434 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 ZDHHC12Q96GR4 267 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 RTKNQ9BST9 563 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.95□□□□□ -0.66
SNX13-202ENST00000409604 PREBQ9HCU5 417 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 SEMA3GQ9NS98 782 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 KRT84Q9NSB2 600 aa10.95□□□□□ -0.66
SNX13-202ENST00000409604 K7EQS6 105 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 PSMD11O00231 422 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 KIF1CO43896 1103 aaKnown RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 RDH16O75452 317 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 BCHEP06276 602 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 SLC26A3P40879 764 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 OR1E2P47887 323 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 XKP51811 444 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 GSTM4Q03013 218 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 GSTA3Q16772 222 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 TYSND1Q2T9J0 566 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 COMMD6Q7Z4G1 85 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 PDZD3Q86UT5 571 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 RSC1A1Q92681 617 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 BDH2Q9BUT1 245 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ARRDC1-AS1Q9H2J1 176 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 SLC7A8Q9UHI5 535 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms