RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 AREL1O15033 823 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 PRKRAO75569 313 aaKnown RBP12.91□□□□□ -0.34
COL6A2-204ENST00000409416 C6orf47O95873 294 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
COL6A2-204ENST00000409416 ISL1P61371 349 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 TMEM115Q12893 351 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-204ENST00000409416 LRRC26Q2I0M4 334 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 OR2T5Q6IEZ7 315 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 NOXRED1Q6NXP6 359 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 TRUB1Q8WWH5 349 aaKnown RBP12.91□□□□□ -0.34
COL6A2-204ENST00000409416 IRF7Q92985 503 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 DOK1Q99704 481 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 TBCCD1Q9NVR7 557 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 GPSM3Q9Y4H4 160 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 SCN5AQ14524 2016 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 H7BY64 318 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 EBLN1P0CF75 366 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 SDC1P18827 310 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 HPCAL1P37235 193 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
COL6A2-204ENST00000409416 ALG1LQ6GMV1 187 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 B3GNT8Q7Z7M8 397 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
COL6A2-204ENST00000409416 SETD9Q8NE22 299 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 HSH2DQ96JZ2 352 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 PRAP1Q96NZ9 151 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 APOL4Q9BPW4 351 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 ARPC5LQ9BPX5 153 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 MAGEE1Q9HCI5 957 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 IL37Q9NZH6 218 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 TAC3Q9UHF0 121 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 PPT2Q9UMR5 302 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 CA5BQ9Y2D0 317 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
COL6A2-204ENST00000409416 TMEM221A6NGB7 291 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 FABP3P05413 133 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 SERPINB10P48595 397 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 TAS2R50P59544 299 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 POLR2LP62875 67 aaKnown RBP12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ID2Q02363 134 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 TOP3AQ13472 1001 aaPredicted RBP12.9□□□□□ -0.34
COL6A2-204ENST00000409416 DGUOKQ16854 277 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF542PQ5EBM4 170 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ERAP2Q6P179 960 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 NEK10Q6ZWH5 1172 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 HEATR4Q86WZ0 1026 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 GHDCQ8N2G8 530 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 KCT2Q8NC54 265 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ZHX1-C8orf76Q96EF9 292 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 PALMDQ9NP74 551 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 C11orf16Q9NQ32 467 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 IL20RAQ9UHF4 553 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ENPP5Q9UJA9 477 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 FZD4Q9ULV1 537 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 BTBD3Q9Y2F9 522 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 KCNE2Q9Y6J6 123 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 NLRC5Q86WI3 1866 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 SLC35F4A4IF30 521 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ARHGEF33A8MVX0 844 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 RGS10O43665 173 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ERN1O75460 977 aaKnown RBP12.9□□□□□ -0.34
COL6A2-204ENST00000409416 HPRP00739 348 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 PORP16435 677 aaPredicted RBP12.9□□□□□ -0.34
COL6A2-204ENST00000409416 LAG3P18627 525 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 SLC16A1P53985 500 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 TUBA3CQ13748 450 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ADPRMQ3LIE5 342 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 RPS26P11Q5JNZ5 115 aaPredicted RBP12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF691Q5VV52 312 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF852Q6ZMS4 543 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 GPR149Q86SP6 731 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 SUSD6Q92537 303 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 CEP295NLQ96MC4 621 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 ZNF641Q96N77 438 aaPredicted RBP12.9□□□□□ -0.34
COL6A2-204ENST00000409416 SAMD11Q96NU1 681 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 PTPRDP23468 1912 aa12.9□□□□□ -0.34
COL6A2-204ENST00000409416 TMEM189-UBE2V1I3L0A0 370 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 J3KTA2 159 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 M0QX08 132 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 PPM1DO15297 605 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 POP7O75817 140 aaKnown RBP12.9□□□□□ -0.35
COL6A2-204ENST00000409416 DLGAP3O95886 979 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 C1SP09871 688 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 CD36P16671 472 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 TIE1P35590 1138 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 SPINT3P49223 89 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 DAPP51397 102 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 VLDLRP98155 873 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 MXD1Q05195 221 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.35
COL6A2-204ENST00000409416 SLC13A2Q13183 592 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 IRF5Q13568 498 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 KIAA0040Q15053 153 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 DGLUCYQ7Z3D6 616 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 YAF2Q8IY57 180 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 VPS37AQ8NEZ2 397 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 OR10G6Q8NH81 332 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 PROX1Q92786 737 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 NEIL2Q969S2 332 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms