RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 PWWP2BQ6NUJ5 590 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 RIPOR1Q6ZS17 1223 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 PRSS41Q7RTY9 318 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 CLYBLQ8N0X4 340 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 TBC1D19Q8N5T2 526 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 LIN37Q96GY3 246 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 C3orf30Q96M34 536 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC29A3Q9BZD2 475 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 NUF2Q9BZD4 464 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 AKAP7Q9P0M2 348 aaPredicted RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 DHCR7Q9UBM7 475 aaKnown RBP13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 RARRES3Q9UL19 164 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC12A4Q9UP95 1085 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 B3GALT1Q9Y5Z6 326 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 SCN2AQ99250 2005 aa13.45□□□□□ -0.26
CHRNA1-204ENST00000409323 CCDC187A0A096LP49 1063 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 H3BMH7 237 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 RTCAO00442 366 aaKnown RBP13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 PLD2O14939 933 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 KRT6AP02538 564 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 KRT6BP04259 564 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 NTRK1P04629 796 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF888P0CJ79 500 aaPredicted RBP13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF28P17035 718 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 AHRP35869 848 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 KRT6CP48668 564 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 PLA2G16P53816 162 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 SEC24CP53992 1094 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 ITGA1P56199 1179 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 ACY1Q03154 408 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 TMPRSS7Q7RTY8 843 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 LRRC34Q8IZ02 419 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 OR2T11Q8NH01 316 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 UBE2E3Q969T4 207 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 REPS1Q96D71 796 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF317Q96PQ6 595 aaPredicted RBP13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 SARGQ9BW04 601 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 ACPTQ9BZG2 426 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 FAM107BQ9H098 131 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 EPN3Q9H201 632 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 FANCEQ9HB96 536 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 FER1L5A0AVI2 2057 aa13.44□□□□□ -0.26
CHRNA1-204ENST00000409323 TEX51A0A1B0GUA7 166 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF860A6NHJ4 632 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 ZSCAN9O15535 394 aaPredicted RBP13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF749O43361 778 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 GBAP04062 536 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 FGF4P08620 206 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC35G6P0C7Q6 338 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 IL1RNP18510 177 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 GABREP78334 506 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 MC2RQ01718 297 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 MAVSQ7Z434 540 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 PPP1R3BQ86XI6 285 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 TMEM126BQ8IUX1 230 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 WDR75Q8IWA0 830 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 GPR135Q8IZ08 494 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 GALNT15Q8N3T1 639 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 USP7Q93009 1102 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 TM4SF19Q96DZ7 209 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 C10orf90Q96M02 699 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 C7orf26Q96N11 449 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 MS4A8Q9BY19 250 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 MRPL1Q9BYD6 325 aaKnown RBP13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 RHBGQ9H310 441 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 NT5DC2Q9H857 520 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 NDOR1Q9UHB4 597 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 SERTAD3Q9UJW9 196 aa13.43□□□□□ -0.26
CHRNA1-204ENST00000409323 GOLGA8QA0A0J9YX86 632 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 HYKKA2RU49 373 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 GOLGA8OA6NCC3 632 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 LRIT2A6NDA9 550 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 GOLGA8NF8WBI6 632 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 ERI3O43414 337 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 EDF1O60869 148 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 DNAJB6O75190 326 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 TNFSF15O95150 251 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 ALAS2P22557 587 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 RGS1Q08116 209 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 IMPG1Q17R60 797 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 PRTGQ2VWP7 1150 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 RGS9BPQ6ZS82 235 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 TTLL10Q6ZVT0 673 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 AMER3Q8N944 861 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC38A9Q8NBW4 561 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 CAMKVQ8NCB2 501 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 TRPV3Q8NET8 790 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 WDR36Q8NI36 951 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 C17orf62Q9BQA9 187 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC7A5P2Q9GIP4 190 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 REXO4Q9GZR2 422 aaKnown RBP13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 CHRNA10Q9GZZ6 450 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 NPHS2Q9NP85 383 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 FOXJ2Q9P0K8 574 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms