RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TGIF2Q9GZN2 237 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 NAALAD2Q9Y3Q0 740 aa17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 HEMK1Q9Y5R4 338 aaPredicted RBP17.01■□□□□ 0.31
PDLIM2-206ENST00000409141 SOCS6O14544 535 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 MTHFD2P13995 350 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 MAGEA12P43365 314 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 AGTR2P50052 363 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 EMP2P54851 167 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 HERC3Q15034 1050 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 XKR6Q5GH73 641 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 TMIGD1Q6UXZ0 262 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 LRRC70Q7Z2Q7 622 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF605Q86T29 641 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 PTRH1Q86Y79 214 aaKnown RBP17■□□□□ 0.31
PDLIM2-206ENST00000409141 PLD6Q8N2A8 252 aaKnown RBP17■□□□□ 0.31
PDLIM2-206ENST00000409141 VPS50Q96JG6 964 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 EHD1Q9H4M9 534 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF358Q9NW07 568 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 HCN3Q9P1Z3 774 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 OPTCQ9UBM4 332 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 G3BP2Q9UN86 482 aaKnown RBP17■□□□□ 0.31
PDLIM2-206ENST00000409141 ASB1Q9Y576 335 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 HS3ST3B1Q9Y662 390 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 MED13Q9UHV7 2174 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF462Q96JM2 2506 aa17■□□□□ 0.31
PDLIM2-206ENST00000409141 URADA6NGE7 173 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 IDSB3KWA1 339 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 K7EM74 188 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 KLHL18O94889 574 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 HEXBP07686 556 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 GFAPP14136 432 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ALOX12P18054 663 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 NR1D1P20393 614 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 GCAP28676 217 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 HNF4AP41235 474 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 DOC2AQ14183 400 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PFKFB4Q16877 469 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ADGRD1Q6QNK2 874 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 KIRREL2Q6UWL6 708 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ASB18Q6ZVZ8 466 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ABHD13Q7L211 337 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PDSS2Q86YH6 399 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ZC3H7AQ8IWR0 971 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 TTLQ8NG68 377 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 OR51Q1Q8NH59 317 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 UBTD2Q8WUN7 234 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PTCD3Q96EY7 689 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 SCYL1Q96KG9 808 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 CCDC77Q9BR77 488 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PITHD1Q9GZP4 211 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 NT5DC2Q9H857 520 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ATP13A2Q9NQ11 1180 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 CPSF2Q9P2I0 782 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 FBXL4Q9UKA2 621 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PCDHGA9Q9Y5G4 932 aaKnown RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 K7EPI3 171 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 MASP2O00187 686 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PRAMEF4O60810 478 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 RDH16O75452 317 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 CEACAM4O75871 244 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 SERPINA6P08185 405 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 RBP1P09455 135 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 ZNF888P0CJ79 500 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 COL6A2P12110 1019 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 TNFRSF8P28908 595 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PGDP52209 483 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 IRF8Q02556 426 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 CHIT1Q13231 466 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 HIST2H2ACQ16777 129 aaPredicted RBP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 DEFB134Q4QY38 66 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PRAMEF9Q5VWM5 478 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 HIST2H2AA3Q6FI13 130 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 AFAP1L2Q8N4X5 818 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 CREB3L4Q8TEY5 395 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 CCT6BQ92526 530 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 EFCAB11Q9BUY7 163 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 SLC6A16Q9GZN6 736 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 EPB41L4BQ9H329 900 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 MKL2Q9ULH7 1088 aa16.99■□□□□ 0.31
PDLIM2-206ENST00000409141 PCSK5Q92824 1860 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 ANKDD1BA6NHY2 528 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 GALR3O60755 368 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 BMP10O95393 424 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 EPORP19235 508 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 XCR1P46094 333 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 ALDH18A1P54886 795 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 RAB8AP61006 207 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 SKP1P63208 163 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 HYAL2Q12891 473 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 LAPTM5Q13571 262 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 RAPSNQ13702 412 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 SETDB1Q15047 1291 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 TSNAXIP1Q2TAA8 658 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 TUBB8Q3ZCM7 444 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 TECRLQ5HYJ1 363 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 PAGE2BQ5JRK9 111 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 TOR1AIP1Q5JTV8 583 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 MFSD4BQ5TF39 518 aa16.98■□□□□ 0.31
PDLIM2-206ENST00000409141 FAAH2Q6GMR7 532 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms